KEGG   Agrobacterium vitis VAT03-9: RvVAT039_pl07060
Entry
RvVAT039_pl07060  CDS       T08809                                 
Name
(GenBank) ABC transporter ATP-binding protein
  KO
K02052  putative spermidine/putrescine transport system ATP-binding protein
Organism
avv  Agrobacterium vitis VAT03-9
Pathway
avv02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:avv00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RvVAT039_pl07060
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:avv02000]
    RvVAT039_pl07060
Transporters [BR:avv02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    RvVAT039_pl07060
SSDB
Motif
Pfam: ABC_tran TOBE_2 SMC_N AAA_21 TOBE ABC_ATPase AAA_16 nSTAND_NTPase5 AAA_23 AAA_29 AAA_22 AAA T2SSE AAA_14
Other DBs
NCBI-ProteinID: BCH67873
LinkDB
Position
pRvVAT039b:complement(162336..163421)
AA seq 361 aa
MTMPQPAYESILSLDGVDKTYGRFGKPALDRVSFDVAPGEFFSILGPSGSGKTTILRTIA
GFETPDRGRVMMSGEDVSNIPPNKRNVRTVFQSYALFPHMSVMQNVQYTLRMQGIGKSER
LIEAEKALDLVEMGSFAARLPHELSGGQRQRVALARAIVSKPKILLLDEPLGALDLRLRQ
QMQHTLVSLQKELQMAFVYVTHDQGEALSMSNRVLVMREGRIAQLGKPQDLYFAPRSEFV
ARFVGNSNMLPVDFVREGETCVAMIGGVRFPGIVRNEPRSGRIAVRYDDVTVDAEDGRTV
PATLAGIVDNILFLGTTLEVNVRCGDQMILSSIPATQTTRLTSGQPVRVGFNLSQAQVFD
V
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgacgatgccccagccagcatatgaaagcattctctccctcgatggagtcgacaagacc
tatggccggtttggcaaaccggccctcgatcgcgtttccttcgatgtcgcccccggagaa
ttcttctccatcctcggcccgagcggatctggaaagaccacaatccttcgaacgattgcc
ggtttcgaaacgccggatcgtggccgtgtgatgatgtccggtgaagatgtctcgaacatc
ccgcccaacaagcggaatgttcgcacggtcttccaaagctatgcgctgttcccgcatatg
tccgtcatgcagaatgttcaatacaccttgcgcatgcaggggattggcaaaagcgagcgg
ctgatcgaggctgaaaaggcgcttgatctcgtcgagatgggcagctttgccgcgcggctg
ccgcatgagctctcaggggggcagcggcaacgtgtcgctctggcacgcgccatcgtgtcg
aagccaaaaattcttcttctcgacgagccgctgggcgcgctggacctgcggcttcgccaa
caaatgcagcacacgctggtctccttgcagaaggaactgcaaatggcctttgtgtacgtg
acgcacgatcagggggaggcgctctccatgtccaaccgcgtgctggtcatgcgcgagggc
cgcatcgcccagctcggcaagccgcaggatctgtatttcgccccgaggtcggaatttgtg
gcgcgattcgtcggcaattcaaacatgttgccggtcgattttgtccgggagggggaaaca
tgcgtcgccatgatcggcggggtgcgttttcccggcatcgtcagaaacgagccgagaagc
ggcaggatcgcggtgcgctacgatgatgtcactgtcgatgccgaggatggcagaacggta
cccgccacgctcgcaggcatcgtcgacaacatcctgtttcttggtacgacccttgaggtg
aacgtgcgctgcggcgatcagatgatcctgtccagcatccccgcgacccaaacgacaagg
ctgaccagcggccagcccgtcagggtcggtttcaatctcagccaggcgcaggtatttgat
gtataa

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