Agrobacterium vitis VAT03-9: RvVAT039_pl08310
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Entry
RvVAT039_pl08310 CDS
T08809
Symbol
hupT
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avv03032
]
RvVAT039_pl08310 (hupT)
03036 Chromosome and associated proteins [BR:
avv03036
]
RvVAT039_pl08310 (hupT)
03400 DNA repair and recombination proteins [BR:
avv03400
]
RvVAT039_pl08310 (hupT)
DNA replication proteins [BR:
avv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RvVAT039_pl08310 (hupT)
Chromosome and associated proteins [BR:
avv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RvVAT039_pl08310 (hupT)
DNA repair and recombination proteins [BR:
avv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RvVAT039_pl08310 (hupT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BCH67998
UniProt:
A0AAN1X6S6
LinkDB
All DBs
Position
pRvVAT039b:complement(292043..292321)
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AA seq
92 aa
AA seq
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MTTTNEIADKIAADNGLTKVQAKGIVESVFQAIADAAGSDAETSIPGFGKFKVKTSPERE
GRNPATGEKMTVAASKKLTFAPAKALKDALNK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccaatgaaatcgccgacaagatcgccgccgacaacggcctgacaaaggtt
caggccaagggcatcgtcgaatccgtgttccaggccatcgccgacgccgcaggctccgac
gcggaaacgtcaatccccggcttcggcaaatttaaggtgaaaacatcacctgagcgcgag
ggtcgcaatcccgcgaccggagaaaaaatgactgttgcagcttcgaagaagctgactttc
gcgcctgccaaggccctcaaggatgcactgaacaagtga
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