KEGG   Agrobacterium vitis VAT03-9: RvVAT039_pl08390
Entry
RvVAT039_pl08390  CDS       T08809                                 
Symbol
vgrG
Name
(GenBank) fimbrial protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
avv  Agrobacterium vitis VAT03-9
Pathway
avv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:avv00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RvVAT039_pl08390 (vgrG)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:avv02044]
    RvVAT039_pl08390 (vgrG)
Secretion system [BR:avv02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RvVAT039_pl08390 (vgrG)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp44-like_2nd Gp5_C
Other DBs
NCBI-ProteinID: BCH68006
LinkDB
Position
pRvVAT039b:complement(298590..300815)
AA seq 741 aa
MDDVLSPADFIQASRVLKLSSPLGEDQLLPERMTVDEGVNRLFEITVSVRAKREAVKPEE
LIGKLVDISLEIRQGELDGDGVRRPFNGLVTNLSEGPPVTRGLRSYTLTIRPQLWLLSRR
SDCRIWQNMTAIQVMETLFSEHGIPAPAYAPLHRTPPSREYSTQWNETDLDYLLRRFEQE
GLFYWFEHETGVHRLKVSDSKVAWGSPSAAAEGEQNVRLAQGSSDRNHINEWMRQFSYIP
GQRAGADWNFETPSTVPLNVTPSLIQMPGAAKRELYEYPASISDVKEAEVAETFRMQAVE
ADHERVTGQSNVRFLEAGRRFTPYEEPHPEHKYEEHVITRIMHRVVDRSYETASNEMEYA
NAFEAIPSRVPLTPHRETRRPRIEGTQVAIVAGPSGEEIHTDQYGRLKLWFPWDRKAQKD
GSDTCWVRVAQAWGGGTWGAQVIPRIGMEVMVSFVDGDPDRPLVIGVVPNPKNPVPYELP
ANKTRMVLRSNTHKGSGFNEMTFEDENGKENMFFHAQKDQTIKVLNNRVKRVDAHQVESI
GQNKSIDVGQNHQEKIGGSKNVTVGGGASSSLLASLASIAAAGGIDSKNGSSAIGHGLLQ
EFAGAMASAGVTAEVASLSANADVTNAGNFRTAAGTEQASTGSTLGGLLGKILPISGIVN
TVIEKFRSDTIGIARTEQIGLYKNTTVGHTMTINAGEEFIIKCGESKLMMDKAGNVTIVG
TKFNFAASGHVQINGEVIDLN
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggacgacgttctatcacccgccgatttcatccaggccagccgtgtgctaaaattatca
tcgcccctgggtgaagaccagttgctgcctgagcggatgacggtggatgaaggcgtcaat
cgcctgttcgaaatcactgtgtcagttcgggccaaacgcgaggcagtcaagcctgaagaa
ctgatcggcaagctggtcgatatctccctggaaatccgccagggtgaactggacggggat
ggcgtgcgccggccgttcaacgggctggtgacaaacctgtccgaaggaccgccagtgacg
cgcggacttcgctcctataccctgaccatccgtccgcaactgtggctgctgtcgcgccga
tccgattgccggatctggcagaatatgacggcgatccaggtgatggaaaccctgttttcc
gagcatggcattccggcccccgcatatgctcctctgcatagaacgccgccgtcgcgggaa
tattcaacgcaatggaacgagaccgatcttgattatctgctgcggcggttcgagcaagaa
gggttattctactggtttgaacatgagaccggcgttcaccgcctgaaggtcagcgacagt
aaggtggcctggggctcgccatcggctgcggcagaaggcgaacagaatgtacgtcttgcc
caaggctcatcagatcgcaaccacatcaacgaatggatgcgacagttctcctacatcccc
ggccagcgcgccggtgcggactggaattttgagacgccgagcactgtgccgctgaatgtc
acgccatctctgatccagatgccgggggccgccaaacgcgagctttacgaatatcctgcc
agcatctccgatgtcaaagaagccgaagtggccgaaacctttcggatgcaggccgtggag
gctgatcatgagagggtgacgggccagtccaatgtgcgctttctggaagccggtcgccgg
ttcacgccctatgaggaaccgcatccggagcataaatacgaagagcatgtgattacccgc
atcatgcatcgggtggtggaccgctcctatgagacggccagcaatgagatggaatatgcc
aacgcgttcgaggcgatcccgtcacgcgtgccgctaacgccgcaccgggagaccaggcgt
ccgcgcatcgaggggacacaggtggcgattgtcgccggaccatcgggcgaggagatccac
acggatcaatacggacgactaaaattatggttcccctgggatagaaaagcccagaaggac
ggcagtgatacctgctgggtgcgtgtcgcccaggcctggggcggtggcacctggggtgcg
caggttattccgcggattggcatggaagtgatggtgtcgttcgtggatggcgatccggat
cggccattggtgattggcgtggtgccgaacccgaaaaacccggtgccttatgagctgccc
gcgaacaagacccgcatggtgctgcgctccaacacccacaagggcagcggcttcaacgag
atgaccttcgaggacgagaacggcaaggagaatatgttcttccatgcccagaaggatcag
accattaaagtgttgaataatcgcgtcaaacgggttgatgctcatcaggtcgaaagtatc
gggcagaataaatcgattgatgtcggtcagaatcatcaggaaaaaataggcggttctaaa
aatgtcaccgttggcggaggtgcaagctcttctctgttggcgtcccttgccagtatcgcg
gcggccggtggcatagacagcaagaacggttcgtctgctatcggtcacggtctgttgcag
gaattcgccggggccatggcttcggcgggagtaacggcggaggttgcgtctttatcggcg
aatgcggatgtcaccaatgccggcaatttcagaacggcggccggcacggagcaggcatcg
acgggatcgacccttggcggactgttgggcaaaattctgccgatcagcggcatcgtcaac
acggtgatcgaaaaatttcgctccgacaccattggaattgcccgaaccgaacagatcggt
ctctacaagaacaccaccgtcggtcacaccatgaccatcaacgctggcgaggaattcatc
atcaaatgtggcgaatccaagctgatgatggacaaggctggcaatgtcacgatcgtcggc
acgaagttcaatttcgccgcatcgggacatgtccagatcaacggcgaagtcatcgatctg
aactga

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