Agrobacterium vitis VAT03-9: RvVAT039_pl08760
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Entry
RvVAT039_pl08760 CDS
T08809
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02010
ABC transporters
avv02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAT039_pl08760
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAT039_pl08760
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_pl08760
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RvVAT039_pl08760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
B-block_TFIIIC
Yae1_N
Motif
Other DBs
NCBI-ProteinID:
BCH68043
LinkDB
All DBs
Position
pRvVAT039b:337128..338243
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AA seq
371 aa
AA seq
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METKSRIGVLAALLCASAITPVAAQDKAVPDGVMSHKFAWGDFKLAPRIADKLKTGKPVN
IVIQVAGTGVPISGAQFKFGTVKGCEDAKAAGLNANCRLVGPVNPDPAQQINELETLLNS
DQVDCLGVQAPLPNQFNAIINRYVDAGVPAMTLNNDAAKSKRFSFSALNEVAAGRFNGEA
TAKLVKEMRLTITEVALGSGGPDEPWAQGRMQGFQEGFKASYPDVKFFNDYKTGLPTSRN
YTTAEVIDSVTPFLTGNPKVNLFFHTDQGVEGVARVINNLGLTGKSFTSGFNVSGAILDD
IEAGRTLVTIDQGFDNQSEAAVKQCVAYLTKGDVPADPLQYLNPIVITKAGGDGMITVEA
AKARLKAALGK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaagtcacgcattggcgttcttgctgctcttctttgtgcaagcgcgatcaca
ccggtcgcagcgcaggacaaagctgttcccgatggcgtcatgtcgcacaagttcgcttgg
ggcgactttaagctcgcaccccgcatcgccgacaagctgaagaccggaaagccggtcaac
atcgtcattcaagttgccggaacaggcgtgccgatttccggcgcccagttcaagtttggt
accgtcaagggttgcgaagatgccaaggcggccggcctcaacgcaaactgccgcctggtc
ggcccggtcaacccggatccggcacagcagatcaacgaacttgagacgcttctcaactct
gatcaggtcgattgccttggcgtccaggcaccgctacccaatcagttcaacgccatcatc
aaccgttacgtcgacgccggcgttccggcgatgacgctgaacaacgatgctgccaagtcc
aagcgcttctcattctcggcgctgaacgaagttgctgccggacgtttcaacggcgaagcg
acggcaaagctggtcaaggaaatgcggctaaccataaccgaggtggccctcggtagcggc
ggcccggatgagccctgggcccagggccgcatgcagggctttcaggaaggcttcaaggcc
tcctatccagatgtgaagttcttcaacgactacaagaccggcctgccgacgagccggaac
tacaccacggcggaagtcatcgacagcgtgacgccgttcctgacgggcaacccgaaggtc
aatctgtttttccataccgaccagggtgtcgagggcgttgcgcgcgtcatcaacaatctg
ggcctgaccggcaaatcctttacttcgggcttcaacgtcagcggcgcaattctggacgat
atcgaagcgggccggacgctcgtcaccatcgatcagggcttcgacaatcagtccgaagct
gcagtaaagcaatgcgtggcctacctgaccaagggcgacgttcccgctgatccccttcaa
tacctgaacccgatcgtcatcacgaaggctggcggagatgggatgatcacggtcgaggcc
gccaaggcccgcctgaaggctgcgctcggaaagtaa
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