Agrobacterium vitis VAT03-9: RvVAT039_pl09200
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Entry
RvVAT039_pl09200 CDS
T08809
Name
(GenBank) IS6 family transposase
KO
K07498
putative transposase
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RvVAT039_pl09200
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_IS240
DDE_Tnp_IS66
rve
Motif
Other DBs
NCBI-ProteinID:
BCH68087
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All DBs
Position
pTiRvVAT039:complement(7571..8233)
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AA seq
220 aa
AA seq
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MIAHAVWLYFRFPLSLRMVEDMLAARGLIVSHQTVRLWAEKFGRHFANDIRKRSAGRLGD
KWHFDEVVITIAGKKHWLWRAVDQDGFVLDVLVQSRRDAKAAKRLMRKLLKGQCRAPRVI
ITDKLRSYGAAKRDIMPGIEHRSHKGLNNRAENSHQPVRRRERIMRRFKSARHLQRFVSI
HDPIANLFHVPRHDIPSTHHRELRETAMQTWYQIAGIQAA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgattgcccatgccgtttggctctatttccggtttccgctgagcctgcggatggtcgag
gatatgctggctgcccgtggcctcatcgtctctcaccaaaccgtgaggctctgggcggag
aagttcggtagacattttgccaatgatatccgcaagcgatctgccggcaggctcggtgac
aaatggcacttcgacgaggttgtcatcacgatcgccggcaagaaacattggctctggcgc
gccgtcgatcaggacggttttgttctcgacgtgctggtgcaaagccgccgcgatgccaag
gcggcaaagcgtttgatgcgaaagcttctgaaagggcaatgccgtgcgccgcgtgtgata
atcaccgacaagcttcgatcctacggtgcggcgaagcgtgatatcatgcccggtatcgaa
catcgctcgcacaagggcctgaacaatcgggccgagaattctcatcagcctgtccgacgg
cgtgaaaggattatgaggcgcttcaagtcagcgaggcaccttcaacggttcgtttccatc
cacgatccgattgccaacctctttcacgttccccgccacgacattccatccacccatcat
cgcgaattgcgagaaacagccatgcaaacatggtaccaaatcgctggcattcaagccgcc
taa
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