KEGG   Agrobacterium vitis VAT03-9: RvVAT039_pl09480
Entry
RvVAT039_pl09480  CDS       T08809                                 
Symbol
trbD
Name
(GenBank) conjugal transfer protein TrbD
  KO
K20529  type IV secretion system protein TrbD
Organism
avv  Agrobacterium vitis VAT03-9
Pathway
avv02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:avv00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RvVAT039_pl09480 (trbD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:avv02044]
    RvVAT039_pl09480 (trbD)
Secretion system [BR:avv02044]
 Type IV secretion system
  Trb secretion system protein
   RvVAT039_pl09480 (trbD)
SSDB
Motif
Pfam: VirB3
Other DBs
NCBI-ProteinID: BCH68115
LinkDB
Position
pTiRvVAT039:34742..35041
AA seq 99 aa
MADAGSNLIRSRVHRALSRPNLLMGADRELVLLTALVAVILIFVVLTWYAALFGIAIWLV
AVGALRMMAKADPLMRRVYIRHISYKTFYRATSSPWRKF
NT seq 300 nt   +upstreamnt  +downstreamnt
gtggctgacgccggctccaatctcatccggtcgcgggtccatcgggcgctgtcgcgtccg
aacctgttgatgggcgccgaccgcgaacttgtcctgctgacggcgcttgtggccgtcatc
ctgatcttcgtggtgctgacctggtacgccgcgctgttcgggatcgcgatctggctggtc
gcggttggagccctgcgcatgatggcgaaagccgatccgttaatgcggcgggtctatatc
aggcacatctcctacaaaaccttctaccgcgcgacatcgtcgccatggcgcaagttctga

DBGET integrated database retrieval system