Agrobacterium vitis VAT03-9: RvVAT039_pl09700
Help
Entry
RvVAT039_pl09700 CDS
T08809
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAT039_pl09700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_pl09700
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RvVAT039_pl09700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_25
SMC_N
AAA
Rad17
AAA_22
AAA_19
CysA_C_terminal
nSTAND3
ABC_ATPase
NB-ARC
nSTAND_NTPase5
AAA_5
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
BCH68137
LinkDB
All DBs
Position
pTiRvVAT039:59577..60620
Genome browser
AA seq
347 aa
AA seq
DB search
MSYLRLDRLRKVYGPAVAVDGINLNVEKGEFVSLLGPSGCGKTTTLQMIAGFVEPTSGSI
SLDGAELLKLPPNRRGLGIVFQSYALFPHMTVAQNLSFGLEMRGVSKAEITKRVSEMLDI
VGLSDKAARYPRQMSGGQQQRVALGRALIIKPAILLLDEPLSNLDAKMREEMQIELRQIQ
QTLGTTTVLVTHDQHEALALSDRIVVMSAAKVEQIGTPQDVYETPATPFVASFLGKTNVF
EGTTSADGLTFGDYTVPFSRTHEGRVSFSVRPEKISMSSETQPGLRGRVKTRVFQGDHWL
LQIDTAAGRAIVVSPNNGTFIPLENAEVCLTVKPEDLIVSKAAGERI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctatcttcgtctggatagactgcgcaaggtctacgggcccgccgtcgccgtagac
ggcatcaacctcaatgttgaaaaaggggagttcgtatcgctcctcggcccgtccggttgc
gggaaaacaaccacccttcagatgattgccgggtttgtggagccgacgtcaggcagtatt
agtctcgatggtgccgagcttttgaagcttccgcccaatcgccggggccttggaatcgta
tttcagagctacgccctgtttccgcatatgacagttgcccaaaacctgtcttttgggctg
gaaatgcgcggggtgtcgaaggccgaaataaccaagcgcgtctctgagatgctcgatatt
gttggcctttccgacaaggcggctcgctatccccgccaaatgtccggcggtcagcaacaa
cgcgttgcgctcggccgcgcgctcatcataaagcctgcaatcctgcttctcgatgagcca
ctttccaatctcgacgcaaaaatgcgcgaggaaatgcagatcgagttgaggcagatacaa
cagaccctcggcacgacgaccgttctcgttacccatgatcagcacgaggctttggctctt
tctgaccgtatcgttgtgatgagcgctgcgaaagtcgagcagatcggcacaccccaagac
gtttacgaaactccggccactcctttcgtggcgtcgtttctgggcaagacgaacgtcttc
gagggaacaacgtccgcagacggcctgacgtttggcgattacaccgttccattcagtcgt
acccacgaaggccgggtgtctttctccgtccgaccagagaaaatctcgatgtcgtctgag
acccagcctggtttgcggggtcgggtgaaaacgcgcgtcttccagggcgaccactggctc
ctccagatcgatacggccgcaggtcgcgcgattgtcgtcagtccaaataatggcactttc
attcctctcgaaaacgccgaggtctgtctcaccgtcaagccggaagacctgatcgtcagt
aaagcggcgggggagcggatatga
DBGET
integrated database retrieval system
