Agrobacterium vitis VAT03-9: RvVAT039_pl10780
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Entry
RvVAT039_pl10780 CDS
T08809
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAT039_pl10780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_pl10780
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RvVAT039_pl10780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
TOBE
SMC_N
Rad17
Mg_chelatase
nSTAND_NTPase5
bpMoxR
DUF927
AAA
AAA_16
MIT_C
AAA_22
AAA_30
AAA_5
AAA_29
nSTAND1
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BCH68245
LinkDB
All DBs
Position
pTiRvVAT039:169255..170349
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AA seq
364 aa
AA seq
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MKSGAELSLQDLSKSYDDKKLVLNKLNITAAPGEIVSLLGPSGCGKSTALRIVAGLVGAT
SGRVMLAGKDVTSLPTYKRNIGLVFQNYALFPHMTVLDNVAFGLEMRNVNRKEARSRAGE
ILEMVRLGALGQRRPRQLSGGQQQRVALARALVIHPDLLLLDEPLSNLDAKLREQMQDEI
RDLQQRLGTTAIFVTHDQSEAMAISDHVAIMNEGVIVQYGRPTEIYENPASSFVANFIGR
VNSIDGISNADGDASQQIKTDTGLSIKLAKPSLKGPVQFLIRPSSIEVLPSSTPSEAGRN
RVPASVRKVTYAGDIVSVACDTQGIAMTAEIPGSSSAWRSLEPGQQVTLDWPVASGFVFE
RKAN
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtggtgccgaactcagtctccaagacctctcaaagtcgtatgacgataagaag
cttgtgctcaacaagctgaacatcactgctgcacctggcgaaattgtctcgctcctcgga
ccgtcaggctgcggcaaatcaacagctttgaggattgtcgcagggttggttggagcgacg
tccggccgtgtgatgctggccggcaaggatgtgacatccctgccgacctacaaacgaaat
attggtctcgtcttccagaactacgccttgttcccgcacatgacggtgctggacaatgtc
gcgttcggcctggaaatgcgaaacgtcaaccggaaggaagccagatccagggcgggcgag
attctggagatggtcaggctcggagcgctcggtcaacgccgcccgcgccagctttccggc
ggtcagcaacagcgcgtcgcactggcccgcgctctggtcatccaccccgatctcctcctt
ctcgacgagccactttccaacctcgacgccaagcttcgcgagcaaatgcaggacgaaatt
cgtgacctgcagcaacgcctgggaacgactgccatcttcgtcacgcacgatcagtccgaa
gcgatggcaatctccgatcacgttgccatcatgaatgaaggcgtgatcgtccagtacggt
cgacccacggagatctacgagaacccggcaagcagtttcgtcgccaacttcatcggtcgc
gtgaacagtatcgacggcatcagcaatgcggatggcgatgcgagtcagcagatcaagaca
gacacggggctgtccatcaagcttgccaagccttcgctcaagggacccgttcagtttctg
atcaggccaagttcgatcgaagtcctgccgagctcaaccccgagcgaggctgggcgaaac
cgcgtccccgcttcggtccgcaaggtcacctatgcaggagatatcgtttcagtcgcttgt
gatacccaagggatcgcgatgacagcggaaataccgggctcgtcttcggcctggcgcagc
ctggaacccgggcaacaggtcacattggactggccggtggccagcggctttgtcttcgaa
cggaaggcgaattga
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integrated database retrieval system
