Agrobacterium vitis VAT03-9: RvVAT039_pl10880
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Entry
RvVAT039_pl10880 CDS
T08809
Name
(GenBank) putrescine-binding periplasmic protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAT039_pl10880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_pl10880
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
RvVAT039_pl10880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
BCH68255
LinkDB
All DBs
Position
pTiRvVAT039:complement(181961..182998)
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AA seq
345 aa
AA seq
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MLKYGLLIATTSLLLAGTALSATAEELHIYAWGGGEVPQEIVDDFAKETGIDVTMDTYDS
NETMLAKLSAGASGYDLVEPTQNAVQVLAKQGLLLELDHSKLPNLGNLGATFKDVSYDPG
LKFNVPYVWGTTGLAYNDDCVKQPVTSWKTLWDPQYQGRIFMLDNMLSAYIVALQVNGFH
AGTSKPEEIEKATQSLIEQKKVLGGYNSSSFPELVSSGEACIVQAWNNNVSQVLTENPKV
HYVIPDEGGSMWIDGFAIPKNAKNIEAAYKFMDYIMKPEVAAKAATLSKAATVIDAAKAL
LPKEVADNQAIYPAADKLKKVDFILDVGDAMKLYQDGWTKLKTAQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatacggactccttattgcaacaacgagcctgcttcttgcgggaacggcgctc
agcgcaaccgccgaggaacttcacatctacgcctggggcggcggagaggtgccacaggaa
atcgtcgatgacttcgcgaaggagactggcatcgatgtcaccatggatacgtacgattcc
aacgagaccatgctggcgaagttgtcggcgggcgcttcaggctacgatctcgtcgagccg
acccaaaatgcggtacaggttctcgccaagcagggcctgctactcgaactggaccattcc
aagttgccaaaccttggcaatctgggggctacctttaaggacgtttcctatgaccccggc
ttaaaattcaacgtaccttatgtttggggcaccacggggctcgcctacaacgatgactgc
gtcaaacaacccgtgacgagttggaaaacgctatgggatccgcagtaccagggtcgcatc
ttcatgctcgacaatatgctttcggcctacatcgtcgccctccaggtcaacgggttccat
gcaggaacgagcaagcctgaggaaatcgaaaaggcgacgcagtcgttaatcgagcagaaa
aaggttctcggcggatacaatagcagcagcttccccgaacttgtttcctccggagaagca
tgcatcgtccaggcatggaataacaacgtcagccaggtcctcacggaaaatccgaaggtc
cactacgtcattccggacgagggcggatcgatgtggattgatggttttgccattcccaag
aacgccaaaaatatcgaggcagcctacaagttcatggactacatcatgaagcctgaggtc
gcggccaaggcggcaaccctcagcaaggccgctaccgtcatcgacgcagcgaaggcgctg
ctgccgaaggaagtggccgacaaccaggcaatctacccggcggccgacaagctgaagaag
gttgatttcatccttgatgtcggggacgccatgaaactctatcaagacggttggacaaag
ctgaagactgcccagtag
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