Agrobacterium vitis VAT03-9: RvVAT039_pl12340
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Entry
RvVAT039_pl12340 CDS
T08809
Symbol
hmrR2
Name
(GenBank) heavy metal-dependent transcription regulator 2
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avv03000
]
RvVAT039_pl12340 (hmrR2)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
avv01504
]
RvVAT039_pl12340 (hmrR2)
Transcription factors [BR:
avv03000
]
Prokaryotic type
Helix-turn-helix
MerR family
RvVAT039_pl12340 (hmrR2)
Antimicrobial resistance genes [BR:
avv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
RvVAT039_pl12340 (hmrR2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
Motif
Other DBs
NCBI-ProteinID:
BCH68401
LinkDB
All DBs
Position
pRvVAT039c:58467..58910
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AA seq
147 aa
AA seq
DB search
MNIGEASKASGVSTKMIRYYEQIKLITPAHRTESSYRTYGDSDVHTLQFIRRARDLGFSV
EQMKTLLALWRDRSRASSDVKAIALEHIAELERKAAAIAAMTKTLKHLASHCHGDDRPDC
PIIEGFADTLENIGPGMPSKFGLANVV
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcggtgaagcatccaaggcttcgggcgtctcgaccaagatgatccgctattac
gaacagatcaagttgatcacgcccgcacaccgtacggagtccagctaccgcacatacggc
gacagcgatgtccatacgctgcagttcattcgccgtgctcgtgacctcgggttttcggtc
gaacagatgaagacgctgctagccctgtggcgggaccgttcgcgggcaagctccgacgtc
aaggcgatcgcgcttgaacacatcgcggaactcgagcgcaaggctgcggcgattgccgct
atgacgaagacgttgaagcatctcgccagccattgccacggcgatgatcggccggactgc
ccgatcatcgaaggtttcgccgacaccctggagaacatcgggcctggtatgccatccaag
tttggcctcgccaacgttgtctaa
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