Agrobacterium vitis VAT03-9: RvVAT039_pl12800
Help
Entry
RvVAT039_pl12800 CDS
T08809
Symbol
traA
Name
(GenBank) Ti-type conjugative transfer relaxase TraA
Organism
avv
Agrobacterium vitis VAT03-9
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
AAA_19
Viral_helicase1
AAA_11
SH3_13
TraI_hel_assoc_N
UvrD_C_2
AAA_22
PIF1
AAA_16
DUF3658
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
BCH68447
UniProt:
A0AAN1X7Y5
LinkDB
All DBs
Position
pRvVAT039d:6771..10475
Genome browser
AA seq
1234 aa
AA seq
DB search
MAIYHLSMKPVARGSGRSAVAAAAYRSATKIENQRDGLVHDFRAKQGVEHAEIVLPEGVS
ADWAKDRAALWNAAEFAETRKDARVAREFEIALPHELSSEQRIELAREFSQGLADRYGTA
VDFAVHQPHVEGDVRNFHAHVLMTTRTVGPDGLGAKTHIERANKELLPEGLPTSQMQIRD
IRQSFEQMANEHLARAGLDIRIDHRSHSERGLEIEPTGHMGVHATQIERQGGEVSRNRLD
EDAAKRNADLIREKPEQVLTLITGEKSVFDRHDIARTLHRYINDDAQTFQNAFAKVMASP
ALVELQPERMDAATGEIERARYSTREMVGIESGMAQSAERLSQAQTHGVDRRHVEHAISH
QDEAIRSSVISDTVGKVERGELDAGERDRRISEARLSDEQRAAIEHITGPERISAVVGYA
GAGKSTMLAAAREAWEAQGYQVHGAALSGKAAEGLEESSGIQSRTLASWEYRWKSSVDGR
ASRDQLGSRDVFVIDEAGMVGSRQLAGFVREVERSGAKIVLVGDHEQLQAIGAGAPFRAI
AEQIGHAELSEIRRQNEPWQREASVAFATHRTGEGLAAYRDNGNIRFSETRDEARAEIVR
DYLADVQERPEGSRVAMAHRRADVRAINNEVRSALQQRGELAQGAEAGELSFQTNDGKRS
FAAGDRIVFLQNDRDLGVKNGMLGTVHAVEPNALQVQLDGKVLETGEGGSGSIRIDANSY
QSFDHGYATTIHKNQGATVDRAFVMASATMDRHLTYVAMTRHRDGVQLYAAQDEFAGRNA
DQMLAPGRLVEHGRAPYEHKPGNRDSYFVTLENDKGERHTTWGVDLERAVKEARPEIGAK
IGLEHAGAETVRLPDGTTAERNSWKVHDAEELAFKGLEARLSRSGVKEMTLDYISDFAER
RGVANHFGIVSEIDLDPTGRREHESRSLAVPTAREGQDRSISERSAYEERTPSRADPDPK
NVDIAADRQQSQRRSPFEGLKLSRSAATENVPPQDRTEPAQGRPQQPESPKRSMFAGLKL
KGTQERVAPEREDAQRPAPEQDRLAERLRQSSSFEQSVDRFARAWTAMEKMDREGLPVLE
GQKTELRQASHQLDGQRPGASALMVSAMQYDPQTERAMHELTGRERVGQLVAGLDRERAA
QADPNVRADRLINRWQELQEERQGLRGWQNDDARGKVEGQMRQVATTLERDPQVESIVRG
RSQEIGISRVDQEQNIARAMEQQLSRGRSQGIER
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctatcatttaagcatgaagcctgtggcgcgcggctccggtcgaagcgcggta
gctgctgctgcctatcgttctgccaccaagatcgaaaatcaacgcgacggcctggtacat
gattttcgcgccaagcaaggtgtcgagcatgccgagatcgtgctgccggaaggcgtatcc
gccgactgggcaaaggaccgggccgccttgtggaatgcggcggagtttgccgagacgcgc
aaggacgcacgtgtcgcccgcgaattcgagatcgccttgccgcatgagctgtcgtcggag
cagcggattgaactggcgcgggagttttctcaggggctggcggatcgctatggcacagcg
gtggattttgccgtgcatcaaccgcatgtcgagggcgacgttcgcaattttcatgcgcac
gttttgatgacgacgcgaacggtcggtccggacgggcttggggccaagacgcacatcgag
cgagccaacaaggaattgctgcccgagggactgccgacgtcgcagatgcagatccgcgat
atccgtcagtcgttcgagcagatggcgaacgagcatctggcgcgcgccggcctggatatc
cgcatcgatcatcgctcgcattctgaacgcggccttgagattgagccgaccgggcatatg
ggcgtgcatgccacacagatcgagcggcagggcggggaggtgtcgcggaaccgcttggac
gaggacgcggcgaagcgcaatgccgatctgatccgggaaaaaccggaacaggtgctgacg
ctgatcaccggtgagaaaagtgtgttcgaccggcatgacattgcgcggacgctgcatcgt
tatattaacgacgatgcacagacgtttcagaatgcgtttgccaaggtgatggcatcgccg
gcgctggtcgagcttcagccggagcggatggatgctgcgacaggtgagatcgagcgggcg
cggtattcgacccgggaaatggtcgggatcgagtccggcatggcgcagtcggccgagcgg
ttgtctcaggcccaaacccatggagttgaccggcggcatgtcgaacacgcgatcagccat
caggatgaagccattcgttccagcgttatcagcgacacggtcggcaaggtcgagcgcggc
gaacttgatgccggcgagcgggatcgtcgcataagcgaagcgcgactttcggatgagcag
cgggcggcgatcgagcacatcaccgggccggaacggatttctgcggtcgttggttacgcc
ggggccggcaagagcaccatgcttgcagctgcgcgtgaggcctgggaagcccagggctat
caggtccatggggcggctctgtctggcaaggcggctgaaggactggaagagtcgtcgggc
atccagagccgcactctggcgtcctgggaatatcggtggaagtcgagtgtcgacggcagg
gcttcacgcgatcagcttggcagcagagatgtgttcgtcatcgacgaggccggcatggtc
gggagccggcaactcgctggcttcgtcagagaggtcgagaggtccggtgcgaagattgtg
ctggtcggtgaccatgagcagctgcaagcgatcggcgccggcgcgccgttccgggcgatc
gccgagcagatcggccatgcagagctgtcggaaattcgtcggcagaatgaaccatggcag
cgcgaggcgtcggttgcctttgccacccatcgcacgggcgaggggttggctgcctaccgg
gacaacggcaatatccggttcagtgagacgcgcgacgaggcgcgggccgaaattgtccgc
gactatcttgccgacgtgcaagagcggccggagggaagccgtgtggcgatggcgcatcgt
cgcgccgatgttcgcgcgatcaacaatgaggttcgatcggccctgcagcagcgtggtgag
ctggcgcagggtgcggaagccggcgagctgtctttccagaccaatgacggcaagcgatcg
tttgcggcgggcgaccgtatcgtcttcctgcagaacgatcgggaccttggcgtcaagaac
gggatgttgggaacagtgcatgccgtcgagccgaatgcattacaggtacagctcgacggc
aaagtgctggaaaccggggaaggagggtccggttcaattagaatagacgcaaattcttac
caaagctttgaccatggctacgcgacgacgatccacaaaaatcagggcgcgacggtggac
cgtgcctttgtgatggcgtcggctacgatggaccgacatctgacctatgtcgcaatgacc
cggcatcgcgacggcgtacagctctacgccgcccaagacgaattcgccggccggaacgcc
gaccaaatgctggccccaggccggctggtggagcatgggagagcgccctatgagcataag
ccgggcaaccgcgacagctatttcgtgacgctggaaaacgacaagggtgagcggcacacg
acgtggggcgtcgatctcgaacgggctgtgaaagaggcaagaccggagatcggcgcgaag
atcgggcttgaacatgctggagcggagacagtgcggcttccggatggcacgacggcggag
cgcaattcgtggaaagttcacgacgccgaagagctggcattcaagggactggaagcccgg
ctcagccgatcgggcgttaaggagatgacgctcgactatatcagcgactttgccgagcga
cgcggtgtggcgaaccattttgggatagtaagcgaaatcgatcttgatcctaccggccga
cgggagcatgagagccgctcccttgccgttcctacagcaagggagggtcaggatcggtcc
atcagcgagcgttctgcttacgaggagcgtaccccctcgcgggccgatcctgatccgaag
aacgtggatattgccgccgatcgtcagcagagccagcgccgcagtccgttcgaggggctg
aagctttcgcgaagcgcagcgacggagaacgtgccgccgcaggatcgcactgaaccggcc
cagggtcgcccgcagcagccggaaagccccaagcgcagcatgtttgccggcctgaagctg
aaaggcactcaggaacgtgtggcgccagaaagggaggatgcgcagcggccagcgccggag
caggaccggttggccgagcgcttgcggcagtcgtccagttttgagcagtcggttgatcgc
tttgcgcgcgcctggaccgccatggaaaagatggaccgcgagggcttgccggttctcgaa
ggccagaagaccgaattgcgtcaggcgagccatcagcttgatgggcagcggcccggtgcg
tccgccctgatggtttcggcgatgcagtatgatccgcagaccgaacgcgccatgcatgag
cttactggcagggagcgcgtcggccagctcgtcgccggcctggaccgcgaacgggccgcg
caagccgacccgaatgtgcgtgccgatcggctgatcaatcggtggcaggagctccaggaa
gagcgccagggccttcgtggctggcagaacgacgacgcgcgcggcaaggtcgagggacag
atgcgccaggtcgcaaccacactcgagcgggacccccaggtggaatccatcgtgcgcgga
cgaagccaggaaatcggcatcagtcgtgtcgaccaagaacagaacatcgctcgcgcaatg
gaacagcagctttcccgggggcgcagccagggaattgaacggtag
DBGET
integrated database retrieval system
