Acinetobacter venetianus: HWI77_03235
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Entry
HWI77_03235 CDS
T08415
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
avz
Acinetobacter venetianus
Brite
KEGG Orthology (KO) [BR:
avz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avz03016
]
HWI77_03235
Enzymes [BR:
avz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
HWI77_03235
Transfer RNA biogenesis [BR:
avz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
HWI77_03235
Prokaryotic type
tRNA splicing ligases
HWI77_03235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
QNH51823
LinkDB
All DBs
Position
complement(672987..674192)
Genome browser
AA seq
401 aa
AA seq
DB search
MGIQKILNANAQYGVPVKIFTNDIDQESIEQLKKMAQLQFVHSHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLNLKASQLPDNLAPLRHAIERKVPVGFELHKQIK
AKASSVIPLEKRLQPIIKKHPGLVRMLRKFDATWQKQLGTLGGGNHFIELCLDENQDVWI
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSASFNDYVEAVEWAQNY
AFENRREMMRLILEAIRPLLPPFQMTKEAINCHHNYVSREHHFGEDLLITRKGAIRAGRD
ELGIIPGSMGARSYIVKGKANPESFCSCSHGAGRKMSRSKAKLLFSQDDLIHQTQGIECR
KDSGVIDEIPSAYKDIDQVMANQSDLVEILHTLKQILCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaaaatactcaatgcgaatgcacaatatggtgtaccagtaaaaatattc
accaatgacattgatcaagaaagcattgaacaactcaaaaaaatggcgcagctacagttt
gtacattcacatatcgcagtaatgccagatgtacatgtcggcaaaggtgcgactgttggt
agtgtcattccgaccaagcatgcgattatccctgccgctgtcggtgtggatattggctgt
ggaatgaacgcaattcggctgaatttaaaagcttcgcaactacccgacaatttagcgcca
ttgagacatgcaattgagcgcaaagttcctgtaggttttgagttgcacaaacaaatcaag
gcaaaagcctcaagtgttattccactggaaaagcgattgcaaccaatcattaaaaagcat
cctggacttgttagaatgctcagaaaatttgatgctacatggcaaaaacaactgggtact
ttaggaggcggtaatcactttatcgaactctgtctggatgaaaaccaagatgtctggatc
atgctgcattctggtagtcgtggtttagggaatgtgattgggacttattttatcgaacta
gcaaagaaagaagcgcagcatcggtttggacatgttccagacaaagatctgagctacttt
gctgagggttcagccagtttcaatgattatgttgaagcggtggaatgggcacaaaactat
gcttttgagaatcgtcgggaaatgatgcgcctcattttagaagcgattcgaccactcctg
ccgccatttcaaatgaccaaagaagcaattaactgccatcataattatgtcagtcgtgaa
catcattttggtgaagacttactgatcacacgaaaaggtgcaattcgcgcaggcagagat
gagttaggaattattcctggttccatgggagctcgctcttatattgtgaagggcaaagca
aatccagagtctttttgctcatgttcacatggtgcaggaagaaaaatgagtcgtagtaaa
gccaaattactctttagccaagatgatttgattcatcagactcaaggcattgaatgccgt
aaagatagtggtgttattgatgaaatcccaagtgcatataaagatattgatcaagtcatg
gcaaaccaatcagatttagtcgaaatcttgcacacccttaaacaaattttatgcattaaa
ggttaa
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