Acinetobacter venetianus: HWI77_09070
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Entry
HWI77_09070 CDS
T08415
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
avz
Acinetobacter venetianus
Brite
KEGG Orthology (KO) [BR:
avz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avz03016
]
HWI77_09070
Enzymes [BR:
avz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
HWI77_09070
Transfer RNA biogenesis [BR:
avz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
HWI77_09070
Prokaryotic type
tRNA splicing ligases
HWI77_09070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
OrtA
DUF4514
Motif
Other DBs
NCBI-ProteinID:
QNH49920
LinkDB
All DBs
Position
1877087..1878358
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AA seq
423 aa
AA seq
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MSVVEQINQQAQFEQEQQQRAYQVLQNEKSMPIKMWTNGVLVDDNSKQQLLQTAQMPFIH
KWMAVMPDVHFGLGATIGSVIPTKGAIIPAAVGVDIGCGMMATRTSLTASDLPDNLHALR
TELERLIPHGMTKGRGRDRGSWENPPEMVDQAWANLVADFELICAKHPRLKNTNNRKQLG
TLGTGNHFVEVCLDEHDHVWIMLHSGSRGVGNAIGNHFIELARKDMQKHFINLPNKDLAY
LVEGTDHFDDYWFAVGWAQRFAMKNREIMMQAAIKALAIIIPKPFNAKLEAVNCHHNYVE
KEEHYGEEVMVTRKGAVSAKLGQYGIIPGSMGAKSFIVRGLGNQESFCSCSHGAGRVMSR
AEAKRRFTVEDQIVQTEGVECRKDAAVIDEIPSAYKPIEDVMNAQKDLVEVVYTLRQVVC
VKG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgttgaacaaatcaaccaacaagctcaatttgaacaagaacagcaacaacgt
gcttatcaggttcttcaaaatgaaaaaagtatgccgatcaaaatgtggaccaacggagta
cttgttgatgacaactcaaaacaacaattgctacaaaccgcgcaaatgccttttattcat
aaatggatggctgtgatgccagatgttcactttggtttaggtgcgacgatcggaagtgtg
attccaactaaaggtgcaattatccctgctgcggtcggtgtcgatatcggatgtggaatg
atggccacacgtactagcttaactgcatcagatttacctgataatttacatgctttgcgt
accgagcttgaacgtttgattccacatgggatgaccaaaggtcgtggacgagatcgaggt
tcttgggaaaatccacctgaaatggtagatcaagcttgggctaaccttgttgcagatttt
gaattgatttgtgctaagcaccctcgcctaaaaaatactaacaatcgaaaacagctagga
acactaggtactggaaatcactttgtagaagtctgtttggatgaacatgaccatgtttgg
attatgttgcactcaggttcgcgtggtgtgggtaatgccatcggtaatcattttatcgag
ctagcacgtaaagatatgcagaaacactttattaacttacccaacaaagatttagcatat
ttagttgaaggaacagatcattttgatgattactggtttgctgtcggttgggcacaacgc
tttgccatgaaaaaccgtgaaattatgatgcaagccgcgatcaaagctttagcaatcatt
attccaaaaccgtttaatgccaagcttgaggcagtgaattgccaccataattatgtggaa
aaggaagagcattacggcgaagaagtgatggtcactcgtaaaggtgctgtcagcgccaaa
cttggacaatatggaattatccccggttcaatgggtgcgaagtcttttattgttcgtggt
cttggaaatcaggaatcgttttgctcatgttcgcatggtgcaggtcgtgtgatgagccgt
gcggaagccaaacgacgctttacggttgaagatcagattgtacaaactgaaggtgtggaa
tgccgtaaagatgctgctgtgattgatgaaattccatcagcttataaaccgattgaagat
gtaatgaatgcacaaaaagatttggttgaagtggtttatacattaagacaagttgtttgt
gttaaggggtaa
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