Acinetobacter venetianus: HWI77_15505
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Entry
HWI77_15505 CDS
T08415
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
avz
Acinetobacter venetianus
Pathway
avz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
avz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HWI77_15505 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avz03021
]
HWI77_15505 (rpoC)
03400 DNA repair and recombination proteins [BR:
avz03400
]
HWI77_15505 (rpoC)
Enzymes [BR:
avz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HWI77_15505 (rpoC)
Transcription machinery [BR:
avz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HWI77_15505 (rpoC)
DNA repair and recombination proteins [BR:
avz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HWI77_15505 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QNH50999
LinkDB
All DBs
Position
complement(3244455..3248648)
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSEGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLTDEEYYNALEEHGDE
FTAKMGAEAVQDLLKDIDLEAEIARLREEIPQTTSETKLKKASKRLKLMEAFKDSNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLAHV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNR
ALATGKVAIHARVKVRVHQTVIDENGEREQQTIIVDTTPGRCLLWEVVPQGLSFDMINLE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPTKQVIID
KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITESDCGTAGGLVMTPFIQGGDVIEPL
RDRVLGRVTAEDVRRASDDEVVLPRGTLIDEKIAAQLEEAGVDEVKVRSVIACESTFGVC
ARCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHQVSVSRSGEIGIADDLGRERERYKLPYGASILLKDGEAVEAGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQETSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGVVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVVVRQMLRKV
DITDGGDTSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEFELHND
FSEVDQAFSQALNSDQF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgtaagaaaacggattcagaaggtcatgcacctgtt
gaatttgaccgtatccgtattggtcttgcgtcaccagagatgattaagtcatggtctcac
ggtgaagttaaaaaacctgaaaccattaactaccgtacttttaaacctgaacgtgacggt
ttgttctgtgccaaaatttttggtccagtaaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatataaaggcgtcatttgtgaaaaatgtggcgttgaagtaacaactgca
aaagttcgtcgtgaacgtatgggtcacatcgagcttgcttctccagttgcacacatctgg
ttcttgaaatcattaccgagccgtatcggtttacttcttgatatgacattacgtgatatc
gagcgtgtattgtatttcgaatcttatgttgttactgatcctggtatgactccgtttgaa
aagtatcaacttttaacagacgaagaatactacaatgcacttgaagaacacggtgatgaa
ttcactgcgaaaatgggtgcagaagcagttcaggatttattaaaagatatcgatcttgaa
gctgagattgctcgtttacgtgaagaaattccgcaaacaacttctgagacgaaacttaaa
aaagcgtctaagcgtttgaagttgatggaagcattcaaagattcgaacaataagcctgaa
tggatggtgatgaatgtacttcctgtacttccaccagacttacgtccgcttgtaccactt
gaaggtggtcgtttcgcgacttcagacttgaacgatttatatcgtcgtgtgatcaaccgt
aacaaccgtttgaagcgccttcttgaccttgctgcgccagacatcatcgtacgtaacgaa
aaacgtatgttacaagagtctgttgatgcgttgcttgataatggtcgtcgtggtcgtgcg
attacaggttcgaacaaacgtccattgaaatctttggcagatatgatcaaaggtaaacaa
ggtcgtttccgtcaaaacttgttaggtaagcgtgttgactattctggtcgttcggtaatt
accgttggtcctactttacgccttcaccagtgtggtcttccgaagaaaatggcacttgaa
ttattcaagccattcattttcgcaaaactacaagcttctggccaagcaacaaccattaaa
gctgcgaagaaaatggttgagcgtgaaacacctgaagtttgggacgttttagcacacgtt
attcgtcaacatccagtcatgttgaaccgtgcgccaacacttcaccgtctaggtcttcaa
gcatttgaacctatcttgatcgaaggtaaggcaatccgtcttcacccactcgtatgtgct
gcgttcaacgccgacttcgatggtgaccaaatggcggtacacgttccattgacattggaa
gcacagttagaagctcgtgcgttgatgatgtcaacgaataacatcttgtcgcctgcaaac
ggtgagccaattatcgttccttctcaagacgttgtcttgggcctttactacatcacgcgt
gatgcggtaaatgccaaaggtgaaggcatggtatttgcggatactcacgaagttaaccgt
gcgttagcgactggtaaagttgcaatccatgcacgtgttaaagtacgtgtacaccaaact
gtaattgatgaaaatggtgagcgtgaacaacaaacaattattgttgatacgacacctggt
cgttgcttgttgtgggaagttgttccacaaggtttaagcttcgatatgatcaaccttgag
atgactaagaaaaacatctcgaagttaatcaactcttgctaccgtaagcttggtttgaaa
gacactgttatcttcgctgaccaattgatgtatttgggcttccgtcaagcgacgcgctca
ggtgtatctgttggtatggaagacatgttaattccaccaactaaacaagttattattgac
aaggcagaaacagaagttcgtgaaatcgaacaacagtttgagcaaggtttcgtaactgct
ggtgaacgttataacaaagtggtcgatatttgggcgcgtaccaatgaccaagttgcgaaa
gccatgatggataacttgtcttatacacttgtgaaaaacaaacaaggtgaagatgagaag
cagaaatcattcaacagtatctacatgatgtctgactcaggtgcccgtggttcggcagct
cagattcgtcagcttgcaggtatgcgtggtttgatggcgaaaccagacggttcgattatt
gaaaccccaattaaagcaaacttccgtgaaggtttgacagtacttcagtacttcatctcg
acacacggtgcacgtaaaggtttggccgatacggcattgaaaacagcaaactctggttac
ttgactcgtcgtcttgtagacgtagcacaagatttggttattactgaatctgactgtggt
acagctggcggcttagtgatgacaccattcattcaaggtggtgacgttattgaaccatta
cgtgatcgcgtattaggtcgtgtaactgctgaagacgtacgtcgtgcatctgatgatgaa
gtggttcttccacgtggtacgctcattgatgagaaaatcgctgctcagcttgaagaagca
ggtgtcgatgaagttaaagtccgttctgtaatagcatgtgaatcaacattcggtgtatgt
gcgcgttgttatggtcgtgaccttgcacgtggtcacttggtgaatccaggtgaatcagta
ggtgtaatggctgcacaatcaattggtgaaccaggtacacagttaacgatgcgtacgttc
cacgttggtggtgctgcgagccgaacttctgctgcaaacagtgttcaagtacgtaataaa
ggtactgtacgtttccacaacgtgaaaactgtacaacatgccaaaggtcaccaagtatct
gtttcacgttcaggtgaaattggtattgcggatgatttaggtcgtgagcgcgagcgttat
aaacttccttacggtgcaagcatcttgttgaaagatggtgaagctgtagaagctggcggt
attgtagcgacttgggatccacatacacatccactcgttaccgaagttgctggtaaagca
cgtttcagtcagattgctgatggcgtaactgcaacatctaagacagatgatgcaactggt
atgacaacagttgaaatcttgcctgtaacagcacgtcctgcttctggtaaagatttacgt
ccagcgatcgtattggatacaacggatggtggcgaacagttctacttcttaccacaaaat
acaatcgtaactgtccgtgatggcgaaacgattggcgtgggtgacgtcattggtcgtgta
ccacaagaaacttcacgtactcgtgatattactggtggtcttccgcgtgtagctgacttg
ttcgaagcacgtaagccgaaagagcatgcgatccttgcagaagtatcaggtgttgtaagc
ttcggtaaagagaccaaaggtaagaaccgtttagtgatcacgccagatgatggttctgag
atctatgaagagttgattccaaaatggcgtcaaatcaacgtgttcgaaggtgagcatgtg
aaccgtggtgagacaatctctgatggtccacaaaacccacatgatatcttgcgtttgaaa
ggcgaagtagcattaactaactacatcgtgaacgaagttcaagacgtttaccgtctccaa
ggtgtaaaaatcaacgataagcacattgaagttgttgtacgtcaaatgttgcgtaaagtt
gatatcactgatggcggtgatacaagcttcatcaaaggtgagcaagtggattacatccgt
gttgttcaagagaaccaagctgtcttggctcagaacaagttccctgcgaagtttgaacgt
caattgatgggtatcacgaaagcatcgctttctactgactcgttcatttctgctgcatcg
ttccaagaaacaacgcgtgtgttaactgaagcggctgtaacaggtaaagaagatgattta
cgtggcttgaaagaaaacgttgttgtgggtcgcttgatcccagcgggtacaggtcttgcg
tatcacttagagcgtcgtcgccaagaagcagaagctgctgaatttgaacttcacaatgac
tttagtgaagtagaccaagcatttagtcaagcattgaactcagaccagttctaa
DBGET
integrated database retrieval system
