Anabaena sp. WA102: AA650_02375
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Entry
AA650_02375 CDS
T04059
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
awa
Anabaena sp. WA102
Pathway
awa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA650_02375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awa03019
]
AA650_02375
03400 DNA repair and recombination proteins [BR:
awa03400
]
AA650_02375
Enzymes [BR:
awa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AA650_02375
Messenger RNA biogenesis [BR:
awa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AA650_02375
DNA repair and recombination proteins [BR:
awa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AA650_02375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
GerE
ResIII
DUF6115
TnsD
HTH_38
Helicase_Sgs1
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ALB39462
LinkDB
All DBs
Position
complement(589524..591713)
Genome browser
AA seq
729 aa
AA seq
DB search
MLQYPHLEKALKHHFGYDQFRPGQRQIIEDALENRDLMVIMPTGGGKSLCFQLPALLKPG
LTVVVSPLIALMQDQVEALRTNNISATFLNSSLNAYKVRSREEAIMNGKIKLLYVAPERL
VSDRFLPLLDVVKEKVGISTFAIDEAHCVSEWGHDFRPEYRQLRLLRKRYPDVPTVALTA
TATDRVKADIIEQLGLRQPSIHIASFNRQNLYYEVRAKSNRAYAELLEIVRENEGSGIIY
CLTRKKVDEITLKLQNDKISVLPYHAGLSDEERSKNQTRFIRDDVRVMVATVAFGMGINK
PDVRFVVHSDLPRNLESYYQESGRAGRDDEPSKCTLFFNYGDIKTIEWSINQKTDPQEQL
IAKQQLRQVIDYAEGTDCRRTIQLSYFGERFPGNCGNCDNCLYPKPVQDWTIEAMKFLSC
VARCKERYGMLHIIDILRGAKNQRIVVNKHDQLSTYGIGKDKTVDEWRMLGRSLLHQGLI
EQTADGYSILKLNALSWEVMRKQRPVSIAVPIAKKITWEEENVKAADVEVLMQKLRSLRK
ELADEQAVPPYVIFHDSTLKLMAQSQPKTLDEFGNLSGVGSHKLSQYGERFLAEIQKYRQ
EQGLQEKTINRVSSSPHSHSPSDTELTTLELYNQGLSIENIAKQRNVKTATIINHLSNLI
EKKQPVDLSKLVPLERQKKIWNVLEIVGDIALTPIRENLGESYSFDEIRLVRAKWRREKQ
KTIKDDIDF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagtacccacacctagaaaaagccttaaaacatcattttggttatgatcaattt
cgccctggacaacggcaaattatcgaagatgcactagagaatcgtgatttaatggtaatt
atgcccacaggtgggggtaaatctctgtgctttcaattaccggcacttttaaaacccggt
ttaacagtggtagtctcacccttgatagctttaatgcaagatcaagtagaagcactgcga
actaataacatttctgccacatttctgaatagtagtcttaacgcctataaagttcgctcc
cgtgaagaagcgatcatgaatggtaaaataaaattgctttatgtcgccccagaacgcctt
gttagtgaccgatttctcccccttttagacgtagttaaggaaaaagtggggatttccacc
tttgccattgatgaagcccattgtgtctcagaatgggggcatgatttccgcccagaatat
cggcaattaagattactccgaaaacgttatcctgatgtgcctacagttgccctcactgct
accgccacagatagagtcaaggctgatattattgaacaattaggattaagacaaccaagt
attcatattgctagttttaaccgccaaaatctttattatgaagtccgggctaaaagtaac
cgtgcttacgccgaattattagaaatagttagagaaaatgaaggttcgggaattatttat
tgtttaactcgcaaaaaagttgatgaaataactttaaaactccaaaatgataagatttct
gttttgccttatcatgctggtttaagtgatgaggaaagatcaaaaaatcaaactcggttt
attcgggatgatgtgcgagtaatggtagccaccgttgcctttggcatgggcattaataaa
cctgatgtgcggtttgttgtgcattccgatttaccccgaaatctagagagttactatcag
gaatcagggcgagccggtagagatgatgaaccttctaaatgtacattatttttcaattat
ggtgatattaaaactatagaatggagtattaatcaaaaaaccgatcctcaagaacaatta
atagctaaacagcaactaagacaggtaattgattatgcggaagggacagattgtagacgc
acaattcaattaagttatttcggggaaagatttcccggaaattgcggaaattgtgataat
tgtctttatcctaaacctgtccaagattggacaattgaagccatgaaatttctatcttgt
gtggccaggtgtaaagaaagatatggaatgttacatattattgatatattaagaggcgcg
aaaaatcagagaattgttgttaataaacatgatcaactttctacctatggaattggcaaa
gataaaacagtagatgaatggcgaatgttaggaagatcacttttacatcaagggttaata
gaacaaaccgcagacggttattcaattttaaaacttaatgctttgagttgggaagtaatg
cgaaaacaacgcccagtttccattgctgttcctatagcaaagaaaattacttgggaagag
gaaaatgtcaaagcagcagatgtagaagtgctaatgcaaaaattgcgatcgcttaggaaa
gaactcgcagacgaacaagcagtaccaccctacgtcatcttccatgattctaccctcaaa
ttaatggcacaaagccaaccaaaaaccttagatgaatttggcaatctttccggggttggt
agtcataaattatctcaatatggcgaaagattcttagcagaaattcaaaaataccgccaa
gaacaagggttacaagaaaagactattaatcgagttagttcctcacctcattctcactca
ccttctgatacagaattaacaacattggaattatataaccagggtttgagtattgaaaac
atcgctaaacaacgcaacgttaaaactgccacaattatcaatcatctctccaatttaatt
gagaaaaaacaacctgtagatttaagtaaattagtccccttagaacgccaaaagaaaatc
tggaacgtcttagaaattgttggtgatattgccctcacacccattcgggaaaatttaggt
gaaagctacagttttgacgaaattcgtttagttagagcaaaatggcgcagagaaaaacaa
aaaaccattaaagatgatattgatttttag
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