Anabaena sp. WA102: AA650_09170
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Entry
AA650_09170 CDS
T04059
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
awa
Anabaena sp. WA102
Pathway
awa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA650_09170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awa03019
]
AA650_09170
03016 Transfer RNA biogenesis [BR:
awa03016
]
AA650_09170
Enzymes [BR:
awa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AA650_09170
Messenger RNA biogenesis [BR:
awa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AA650_09170
Transfer RNA biogenesis [BR:
awa03016
]
Prokaryotic type
tRNA degradation factors
AA650_09170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
ALB40620
LinkDB
All DBs
Position
2051218..2053374
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AA seq
718 aa
AA seq
DB search
MAEFEKSISFDGRDIRLTVGLLAPQAGGSVLIQSGDTTVLVTATRSAAREGIDFLPLTVD
YEERLYAAGRIPGGIMRREGRPPEKAILASRLIDRPLRPLFPSWLRDDLQVVAITMSMDE
QVPPDVLAVTGASIATLIAQIPFNGPMAAVRVGLVGDDFIINPTYAEIEAGDLDLIVAGS
PDGVIMVEAGANQLPERDIIEAIDFGYEAVRDLIQAQLDLLDELGLKLVQEAPPEVDKTL
ENYIRDRASDEIKKILAQFELTKTDRDIALDAVKDNISAEIKALPEEDPIRIAATADSKA
LGNTFKSITKYFMRRQIVEDNVRVDGRKLDEVRPISCRVGIIPKRVHGSGLFNRGLTQVL
SMCTLGTPGDAQNLNDDLQLEQTKRYLHHYNFPPFSVGETKPLRAPGRREIGHGALAERA
LLPVLPPKDKFPYVIRVVSEVLSSNGSTSMGSVCGSSLSLMDAGVPITKPVSGAAMGLIK
EGDEVRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKISGLSLEVIAQAVNQAKPAR
LHILEKMLQTIDTPREETSPFAPRLLTIKIDPDMIGLVIGPGGKTIKGITEETGAKIDIQ
DDGTVTISAVDENRAKRARNIVQGMTRKLHEGDVYIGRVTRVIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVAVGDEVIVKVREIDNKGRINLTRLGIHPDQAAAAREAAAVNH
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatttgaaaagtcaatatcctttgatggacgggatattcgactgacggttggc
ctactagccccccaagcaggtgggtcggttttgatacaatcaggagatacaactgtttta
gtaacggctacaaggtcagcagcgcgggaaggcattgattttttgccactgaccgtagat
tacgaagaaagattgtacgcagcaggaagaattccaggggggattatgcgccgggaaggt
cgtccaccggaaaaggcaattcttgccagtcgtctgattgaccgtccacttcgtccttta
ttcccctcatggttgcgggatgatttgcaagttgtggcaataactatgtcaatggatgag
caagtcccccctgatgtgttagcagtcacaggcgcttcaattgctactctcattgcccaa
attccttttaatggaccaatggccgcagtgcgagtaggcttggttggtgatgattttatt
attaaccctacctatgcagaaattgaagcgggagatttggatttaatcgttgccggttct
ccagatggggtaatcatggtggaagcgggtgcaaatcaattgccagagcgagatattatt
gaagcgattgattttggctacgaagcggttcgggatttaattcaagctcagttagatttg
ctggatgaactaggtctaaaacttgtgcaagaagccccaccagaagtagataagacatta
gaaaactatatccgcgatcgcgctagtgatgagatcaaaaaaatcttggcgcaatttgag
ttaactaaaactgatcgtgatattgctttagatgcagttaaagataatatctctgctgaa
atcaaagccttaccagaagaagaccccattcgcatcgctgctacagccgactccaaagcc
cttggtaatacattcaagagcattaccaaatacttcatgcgtcgtcaaattgtcgaagat
aacgtgcgcgttgatggtcgtaagcttgatgaagttcgtcctatctcttgtcgagttggg
attatacccaaaagagtacatggtagcggtttatttaaccggggactgactcaggtgcta
tcaatgtgtacccttggtactcctggagatgcccaaaatcttaacgacgacttgcaacta
gaacaaactaaacgttacctgcatcactataacttccctcccttctccgtcggcgaaacc
aaaccattacgcgcccctggtagacgggaaatcggacatggtgcattagcagaacgggca
ttattacctgtattaccgccaaaagacaagttcccctacgtaattcgcgtagtttcggaa
gtgctttcttccaacggttcaacttcaatgggttcagtttgtggttctagtttatccctc
atggatgcaggtgtacccattaccaaacctgtgagcggtgcggcaatgggcttgattaag
gaaggggacgaagtacgaatcctcaccgatatccaaggcattgaagactttttgggtgac
atggacttcaaagttgctggtacagatactggaattacagctttgcaaatggatatgaaa
atatctggtttgtctttagaagtaattgcccaagctgtcaaccaagccaaacctgcccgg
ttacacattctggaaaaaatgctccagactattgacacccccagggaagaaacttcaccc
tttgccccacgtctgttaacaattaagattgatcctgacatgattggtctggtgattgga
cctggtggtaaaaccattaagggtatcactgaagaaacaggtgcaaaaattgacattcaa
gatgatggtactgtcaccatttccgccgttgatgaaaaccgagctaagagagcgcggaac
atcgttcagggcatgactcgtaaactccatgaaggggatgtttatattggtcgtgtgaca
cgggttatacccattggtgcttttgtggaattcttgcccggtaaagaaggcatgattcac
atttctcaactcgctgactatcgcgttggtaaggttgaagatgaggtagctgttggtgat
gaggtgattgtcaaagtgcgagaaattgacaataagggtcgaattaacctaacacgcttg
ggtattcatccagatcaagcagcagcagcacgagaagcagcagcggtaaaccattaa
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