Anabaena sp. WA102: AA650_18165
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Entry
AA650_18165 CDS
T04059
Symbol
rpoC1
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
awa
Anabaena sp. WA102
Pathway
awa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
awa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AA650_18165 (rpoC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
awa03021
]
AA650_18165 (rpoC1)
03400 DNA repair and recombination proteins [BR:
awa03400
]
AA650_18165 (rpoC1)
Enzymes [BR:
awa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AA650_18165 (rpoC1)
Transcription machinery [BR:
awa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AA650_18165 (rpoC1)
DNA repair and recombination proteins [BR:
awa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AA650_18165 (rpoC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
ALB42122
LinkDB
All DBs
Position
complement(4156792..4158684)
Genome browser
AA seq
630 aa
AA seq
DB search
MRSPQNNQFDYVKIGIASPERIRQWGERTLPNGQLVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVAHVWYLKG
IPSYIAILLDMPLRDVEQIVYFNSYCVLAPGNADTLSYKQLLSEDQWLEIEDAIYSEDSQ
LEGVEVGIGAEALLRLLADINLEQEAESLREEIEKAKGQKRAKLIKRLRVIDNFIATGSH
PEWMVMEIIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLKIHQCGLPREMAIELFQPFVINRLIRSGMVNNIKAAKKLISRNDPSVWDVLQ
EVIEGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNILSPATGKPIVTPSQDMVLGAYYLTAENPNATKGAGKYFSSLDD
VIMAYEAQQVELHAYIYVRFDGEIDSGEPDTEPLEVIEDKDAKGRVTSRTLIYKFRRVRE
DGQGNLISQYIYTTPGRAIYNKAIQEAIDA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagatccccccaaaataatcaatttgactacgtaaaaattggtatagcttcgccagaa
cgcatccgccagtggggtgagcgtaccttgcctaatggacaactcgtaggtgaagttacc
aagccagaaactattaattaccgcactctcaagccggaaatggatgggttgttttgtgaa
cggattttcggaccagctaaggattgggagtgccattgtggtaagtataagcgggtgcgc
catagagggattgtgtgcgagcgctgtggtgtagaagtaacagaatcccgcgtccgtcgt
cacaggatgggttttattaagttggctgccccggtggctcatgtttggtatctcaagggg
attcctagctatattgcgattctcctggatatgccgctgcgggatgtggagcagattgtt
tatttcaactcttactgtgttttagcgcctggtaatgcggatactctcagttacaaacaa
ctgttgagtgaagaccagtggctagaaattgaggatgctatctacagtgaagattcccag
ttagagggtgtggaagtgggcattggggctgaggctctgttgcggttgttggcggatatt
aatttggagcaggaggcggaaagcctgcgggaagaaattgagaaagccaagggacagaaa
cgggcgaagttaattaaacggctgcgggtgattgataatttcatcgctaccggttcgcac
ccagaatggatggtgatggaaattatccccgtgattcccccagatttgcgcccgatggtg
cagttggatggggggcggtttgcgacaagcgatttgaatgatttgtatcgccgggtaatt
aatcgcaacaaccgtttggctaggcttcaggaaattctcgccccggagattattgtccgt
aacgagaaacggatgctgcaagaggctgtggatgccttgattgataatggtcgccgggga
cggacggtggtgggggctaataaccgcccgctgaagtcgttgtcggatattattgagggc
aaacaaggacggttccggcaaaacctgttggggaaacgggtggactattcagggcgatcg
gtaattgtggtcggaccaaagctgaagattcaccagtgtggactgccacgagagatggcg
attgagttgttccagccctttgtaatcaatcgtttgattcggtcggggatggtgaataat
atcaaggcggcgaagaagctgatttctcgtaatgatcccagtgtgtgggatgtgttgcag
gaggtgattgagggacatccggtgatgttaaaccgagcgccgacgctgcaccgcttgggg
attcaggcttttgaaccgattttggtggaaggaagagcgattcaattacatcctttggtg
tgtccggcttttaatgctgactttgatggtgaccaaatggcggttcatgtgccgttgtcc
ttggagagtcaggcagaagcacggttgttgatgttggcttctaataatattttgtcaccg
gcaacgggtaaaccgattgtgactcctagccaagatatggtgttgggggcgtattatctg
acggcggaaaatcccaatgcaacgaagggggcaggtaagtatttctcctctttggatgat
gtaattatggcttatgaggcgcaacaggtggaacttcatgcctatatttacgtgcgcttt
gatggggaaattgattcgggtgaaccggatactgaacctttggaagtgattgaggacaag
gatgctaagggtagggtgacaagtcgcaccctaatctataagttccgccgggtacgggaa
gatggtcagggaaatttgatttctcagtacatttatacgactcctggcagggcgatttat
aacaaggcgattcaggaagcgatagacgcttag
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