Anabaena sp. WA102: AA650_20645
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Entry
AA650_20645 CDS
T04059
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
awa
Anabaena sp. WA102
Pathway
awa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA650_20645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awa03019
]
AA650_20645
03009 Ribosome biogenesis [BR:
awa03009
]
AA650_20645
Enzymes [BR:
awa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AA650_20645
Messenger RNA biogenesis [BR:
awa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AA650_20645
Ribosome biogenesis [BR:
awa03009
]
Prokaryotic type
rRNA helicases
AA650_20645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
HEM4
Motif
Other DBs
NCBI-ProteinID:
ALB42541
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All DBs
Position
4684120..4685679
Genome browser
AA seq
519 aa
AA seq
DB search
MNLSFQELGISQERAELLANMGFSEPTNIQTQAIPQLLNGRDVVGQSQTGTGKTAAFSLP
ILERLDPSLKAVQAIVLTPTRELAIQVHAAVSQFIGNSYLKAAAIYGGQSIDRQIMQLRR
GAQIVVGTPGRVIDLLDRGNLKLDQVRWFVLDEADEMLSMGFIDDVERILSQAPEERQTA
LFSATMPPSIRMLVNKFLNSPVTVTVEQPKAAPNKINQVAYMIPRHWTKAKALQPILEME
DPETALIFVRTRRTAAELTSQLQSAGHSVDEYHGDLSQQARERLLIRFRNRQVRWVVATD
IAARGLDVDQLSHVINFDLPDSVETYVHRIGRTGRAGKEGTAISLVQAFERRKQQAFERH
NRQTWQILSIPTKAQIEAQHIQKLRGQVAEALTGERLASFLPIISEMIEEYDAHAIAAAA
LQIAYDQTRPAWLLSGVDLPVEESPTPKPRINKRGDSGERERSSGGGRGGRSSWSKEGKG
NDDRRSSGGGSPKPKLKITHHESSPSPSNHKLGLPTGRE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcatttcaagaattaggcatttctcaagaacgagctgaactgttagcaaac
atgggtttttctgaacctacaaatattcaaacccaagcaattcctcaactattaaatggt
cgggatgtagttggtcaatcccaaacaggaacaggtaaaaccgcagctttttctctacca
attttagaaagattagatcccagcttaaaagctgtacaagccatagttttaaccccaact
cgtgagttagcaattcaagttcatgcggctgtttcccaatttattggtaacagttacttg
aaagcagcggctatttacggtggtcaatcaattgaccgtcaaattatgcaactcagacgt
ggggcgcaaatcgttgtcggtacaccaggacgggtcatagacttactagatcgtggtaac
ttgaaattagatcaagtcagatggtttgtcttagatgaagctgatgaaatgttaagcatg
ggcttcattgacgatgtagagagaattctttctcaagcgcctgaagaacgccaaacagcc
ttattctcagcgacaatgccaccgtcaattcggatgttggtaaataaatttttgaactca
ccggtaactgtcaccgttgaacaacccaaagccgcaccgaataaaatcaatcaagtggct
tacatgattccccgtcattggacaaaagctaaagctttacaaccaattctggaaatggaa
gatccagaaacagctttaatctttgttcgcacccgccgcacagccgcagaattaaccagt
caattacaatctgctggtcatagtgtggatgaatatcatggtgatttgtcccaacaagcc
cgggaacgcctattaatccgtttccgtaaccgtcaagtacgttgggtggtagctactgat
attgcagcgcgtggtttagatgttgaccagctttcccacgttatcaactttgatttaccc
gatagcgtggaaacatacgttcaccggattggtcggactggtcgggctggaaaagaagga
acggcaatttccttagttcaggcatttgaacgccgcaaacaacaggcatttgaacgccat
aaccgtcaaacttggcagattctgtctattcctaccaaggcacagattgaagcccaacat
atccagaagttaagaggacaagttgctgaagctttaactggggaacggttagcttccttc
ttgccgattatcagcgagatgattgaggaatatgatgctcatgcgatcgctgctgctgct
ttacaaatcgcctacgatcaaacccgccccgcttggttactatcaggagtagacctacct
gttgaagaaagcccaactcccaaacccagaatcaacaaacgtggtgatagtggcgaacgt
gaacgcagttccggtggtggtcgcggtggtcgttcctcttggtcaaaagaaggtaaaggc
aacgacgacagacgcagcagcggtggcggtagtcctaaacccaagttgaaaatcactcac
catgaatcttctcctagtcctagtaaccacaagttaggtttaccgacaggtagagaatag
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