Aliivibrio wodanis: AWOD_II_1139
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Entry
AWOD_II_1139 CDS
T03808
Name
(GenBank) exonuclease, putative DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
awd
Aliivibrio wodanis
Pathway
awd03030
DNA replication
awd03430
Mismatch repair
awd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWOD_II_1139
03430 Mismatch repair
AWOD_II_1139
03440 Homologous recombination
AWOD_II_1139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
awd03032
]
AWOD_II_1139
03400 DNA repair and recombination proteins [BR:
awd03400
]
AWOD_II_1139
Enzymes [BR:
awd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWOD_II_1139
DNA replication proteins [BR:
awd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWOD_II_1139
DNA repair and recombination proteins [BR:
awd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWOD_II_1139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CED57754
UniProt:
A0A090IDN3
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All DBs
Position
2:complement(1294301..1295017)
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AA seq
238 aa
AA seq
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MKALLRYFHPLEQIKRKRKQYLTTVKLPEILSELVEQPCPEVAELAKNSDYIVLDLETTG
LDCESDLILSMGWVDVINSKIDLASAQHLYLTNDSQIKPETAIINHITPQMLEKGASIHD
AMAAFFKAAQGKIIVAHACVVECNFINHYLSHAYGLRELPLLWLDTLCIEKKLENAISHH
EDIDLTLSSTRKRYGLPEYNAHNALADAVSTAELLLAQQKRITPNSDVTIGVMYKLSV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgttattaagatattttcaccctttagagcaaataaaaagaaaacgaaagcag
tatcttacgacagttaaattgcctgagatattaagcgagttagttgaacaaccttgccca
gaagtggccgagctagccaagaatagtgattatattgtacttgatttagaaacgacggga
ttagactgcgaaagtgatttgattttatctatgggctgggtcgatgtcattaacagtaaa
attgatttagcttctgcacagcatttgtatttaactaatgattctcagattaaacctgag
acggcgattattaatcatataacaccgcaaatgttagaaaagggagcttctattcatgat
gcaatggcggcattttttaaagcggctcaaggtaaaattattgttgcccatgcgtgtgtc
gtggaatgcaattttattaatcattatttgtctcatgcttatggcttacgtgaattgcca
ttactttggttagataccttatgtattgagaaaaaactagaaaatgcgattagtcatcat
gaagatattgatctaacgttatcgtctactcgtaaacgatatggcttaccggaatataat
gcacataacgcattagctgatgccgtttctactgctgaattactattagctcaacaaaaa
agaatcacaccaaattcagatgttactatcggagttatgtataaattaagcgtataa
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