Aliivibrio wodanis: AWOD_I_0070
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Entry
AWOD_I_0070 CDS
T03808
Symbol
uvrD
Name
(GenBank) DNA helicase II UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
awd
Aliivibrio wodanis
Pathway
awd03420
Nucleotide excision repair
awd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWOD_I_0070 (uvrD)
03430 Mismatch repair
AWOD_I_0070 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
awd03400
]
AWOD_I_0070 (uvrD)
Enzymes [BR:
awd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWOD_I_0070 (uvrD)
DNA repair and recombination proteins [BR:
awd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWOD_I_0070 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AWOD_I_0070 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
PhoH
DEAD
PRA-PH
Motif
Other DBs
NCBI-ProteinID:
CED70168
UniProt:
A0A090ILR8
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All DBs
Position
1:80347..82551
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AA seq
734 aa
AA seq
DB search
MDVSFLLDGLNDKQREAVAAPLENMLVLAGAGSGKTRVLVHRIAWLMQIEQASPFSIMSV
TFTNKAAAEMRGRIEELMHGSAGGMWNGTFHGICHRILRAHYLDAKLPEGFQIIDSDDQQ
RLLKRLIKAQNLDDKNWPARQAAWFINGKKDEGLRPHQINTFNDPIAQTWLKVYTAYQEA
CDRSGLVDFAEILLRAHELLRDHKHVREHYQARFKHILVDEFQDTNNIQYAWLRMMAGPD
CKVMIVGDDDQSIYGWRGAQIENIQKFLDEFVGAKTIRLEQNYRSTANILNAANELISNN
TERMGKKLWTEDADGDLISIYSAYNEMDEARFAVGKIKEWRDNGGALQDSAFLYRNNAQS
RVLEEALIQAGLPYRIYGGMRFFERQEIKDALSYLRLMNNRHDDAAFERVVNTPTRGLGD
KTLETVRFAARERGATMWQASLALIEEQVLPGRAAGALSRFIELINALEDDTRDCRLHEQ
TDQVIKNSGLFTMYEQEKGEKSKARIENLEELVTATRQFDKPEEAEEMTDLTAFLTHAAL
EAGEGQADEFEDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY
VGMTRAMEKLYIIYAETRRVYGQEKYHKPSRFIKELPTNCVEEVRMKAKVSRTGSYGSYG
SQEGSSDSRFGQKAVNNNFNETGYALGQRVKHPKFGEGTIINFEGAGAQGRVQVAFNGEG
IKWLVTQYAKLESM
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttttcttcttgatggtcttaatgacaaacagcgcgaagccgtagccgct
ccgttagaaaacatgcttgtacttgcgggtgccggtagtggtaaaactcgagtacttgtt
catcgtatcgcatggttaatgcaaatcgaacaagcgtctcctttctctattatgtcagtg
acatttactaacaaagcggcggcagaaatgcgcggtcgtattgaagagttaatgcatggc
agtgctggcggaatgtggaatggtactttccatggtatctgccatcgcattcttcgtgct
cattatcttgatgccaaattaccagaaggtttccaaattatcgattcagatgatcagcag
cgtttattaaaacgtttgatcaaagctcagaatttggatgataaaaactggccagcacgt
caagccgcttggtttattaatggtaagaaagatgaaggtttacgccctcatcagatcaat
acctttaacgatcctatcgctcaaacgtggctcaaagtctataccgcttatcaagaagcg
tgtgatcgctctggtttagttgattttgctgaaatcttacttcgtgctcatgaactactg
cgtgatcacaaacacgtacgtgaacattaccaagcacgttttaagcacattttggtcgac
gaattccaagataccaataacatccagtacgcatggttacgcatgatggcgggtcctgat
tgtaaagtgatgatagttggtgatgatgatcaatctatctatggctggcgtggtgcgcag
attgaaaatattcagaaattcttagatgagtttgtgggtgcgaaaaccattcgcttagag
caaaactaccgttcaaccgctaatatcctaaacgctgccaatgaactgatcagtaacaat
acagaacgtatgggtaagaagttatggactgaagatgcggatggcgatctgatctctatt
tattctgcttataacgaaatggatgaagctcgctttgcggtcggtaaaattaaagagtgg
cgcgataacggtggggctctgcaagactctgcattcttataccgtaataacgcccaatct
cgtgtattagaagaagccttaattcaagcaggattaccatatcgtatctatggtggcatg
cggttcttcgaacgacaagagatcaaagatgccttgtcttacttacgcttaatgaataac
cgtcatgatgatgcggcttttgagcgtgtagtaaatacaccaacgcgtggtttgggtgat
aaaacactagaaaccgtacgttttgctgcacgtgaacgcggagcgaccatgtggcaagcc
agtcttgcgttgattgaagagcaagtattaccgggtcgtgctgctggtgcattaagccgt
tttatcgagctaattaatgcattagaggacgatactcgtgactgtcgtttacatgaacaa
acggatcaagtgattaaaaactcaggtctgtttacgatgtatgagcaagagaaaggcgaa
aaatcaaaagcgcgtattgagaacttggaagaactggtaacagcgactcgtcagtttgat
aagccagaagaagcggaagagatgacagacttaacggctttcttaactcatgccgcatta
gaggcaggtgaaggccaagctgatgagtttgaagatgcggttcaattgatgacattgcac
agtgctaaagggttggaattcccattagtatttatggtgggcgttgaagagggcatgttc
ccaagccaaatgtcagcagaagaagctgggcgtttagaagaagaacgccgtctttgttat
gttggtatgacgcgtgcgatggaaaagctgtatattatttacgcagaaactcgtcgagtg
tatggccaagagaaataccacaaaccgtcgcgctttattaaagagctgccaactaactgt
gttgaagaagttcgtatgaaagccaaagtaagtcgaactggatcttatggtagctatggt
tctcaagagggctcatctgacagtcgatttggtcaaaaagctgtgaataataactttaat
gaaactggttatgctttagggcaacgagttaagcaccctaaatttggtgaaggaacgatc
attaattttgaaggcgctggcgcacaagggcgagtacaagttgcctttaatggcgaaggg
attaagtggcttgtgactcaatatgccaagttagagtcgatgtaa
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