Aliivibrio wodanis: AWOD_I_0504
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Entry
AWOD_I_0504 CDS
T03808
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
awd
Aliivibrio wodanis
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
awd03400
]
AWOD_I_0504 (radA)
DNA repair and recombination proteins [BR:
awd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AWOD_I_0504 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
SLFN-g3_helicase
GvpD_P-loop
AAA_22
AAA
AAA_14
AAA_16
Rad51
ABC_tran
nSTAND3
Zn_ribbon_Thio2
RecA
AAA_24
NTPase_1
Viral_helicase1
AAA_29
Zeta_toxin
AAA_5
Zn_ribbon_8
DZR
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
CED70598
UniProt:
A0A090IMS2
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All DBs
Position
1:604271..605653
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AA seq
460 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCSACGAWNTITEVRLAASPQVARNERLTGGYAGSATE
SEVQSLSSIDLQEVPRFSTTFKEFDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCRLA
AEMPTLYVTGEESLQQVAMRASRLGLPKDNLKMLSETSIDRICQIAEKEKPKIMVIDSIQ
VMHVDDVQSSPGSVSQVRESATTLTRYAKQNNVSIFLVGHVTKDGSLAGPKVLEHIIDCS
VLLDGSADSRFRTLRCNKNRFGAVNELGVFAMTGQGLKEVNNPSAIFLSRGEEETSGSSV
MVVWEGTRPLLVEIQALVDYSQLSNPRRVSVGLDQNRLSMLLAVLHKHGGLQMADQDVFV
NVVGGVKVAETSADLALIMALLSSFKDRPLPKDVVVFGEVGLAGEIRPVPSGQERLMEAY
KHGFKRAIVPAANMPKGGIEGMQIHGVKKLSEAIDAFDEL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaaacgtgcctacgtatgtaatgattgtggggcagacttccctcgttgg
caagggcagtgtagtgcttgtggggcatggaacacgataacagaagttcgattagctgct
tcgcctcaagttgctaggaatgaacgtttaaccggtggttatgctggttcagccactgag
tcagaagtacagtctttatcaagtattgatttgcaagaagttcctaggtttagtactacg
tttaaagagttcgatcgtgttttgggtggtggtattgtacctggagccgctattttaatt
ggtggtaatcccggagcaggaaaatcaacgttattgttacaaacgatgtgtcgattagct
gctgaaatgccaacgttatacgttacgggagaagaatctttacaacaagttgcgatgaga
gcatcacgccttggtttgccaaaagataatttaaagatgctttctgaaacaagtattgac
cgaatttgtcaaattgcagaaaaagaaaagcctaagattatggtgatcgattcaattcag
gtaatgcatgttgatgatgtacagtcttctcctggcagtgtctctcaggtgagagaatca
gcaaccacattaacgcgttatgcaaagcagaataatgtgtctatatttcttgttgggcat
gtgacgaaagatggttcacttgctgggccaaaagtactggaacacattattgactgttca
gtactacttgatggcagtgccgatagtcgctttagaacattacgctgcaataaaaaccga
tttggtgcagtaaatgaactgggtgtgtttgcgatgacagggcaggggcttaaagaagtt
aataacccatcagctattttcttgtctcgtggcgaggaggaaacttctggtagctctgtt
atggtggtatgggaagggactcgacctttattagtagaaattcaagcgttagtcgattac
tcccaattatcaaatccgcgtcgagtgtcggttggcttggatcaaaatagattatctatg
ttactggcagtgctgcataagcatggtgggttacaaatggcagaccaagatgtatttgta
aacgtcgttggtggtgtcaaagttgctgaaaccagtgccgatttagcattaataatggcg
cttctgtctagttttaaagaccgtccattacccaaagatgtggtggtatttggtgaagta
ggtttagctggcgaaatccgtcctgtacctagcggccaagagcgattgatggaagcctat
aaacatggatttaaacgtgcaattgtacccgcggcaaatatgcctaaaggtggtattgaa
ggcatgcaaatacatggtgtaaagaaattatcagaagcaattgatgcctttgatgagcta
taa
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