Aliivibrio wodanis: AWOD_I_0540
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Entry
AWOD_I_0540 CDS
T03808
Symbol
nspS1
Name
(GenBank) putative norspermidine sensor I
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
awd
Aliivibrio wodanis
Pathway
awd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AWOD_I_0540 (nspS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
awd02000
]
AWOD_I_0540 (nspS1)
Transporters [BR:
awd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
AWOD_I_0540 (nspS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
CED70634
UniProt:
A0A090KG75
LinkDB
All DBs
Position
1:complement(650183..651238)
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AA seq
351 aa
AA seq
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MQLITLSTFALLSLSLASSAIASSKQNSSLTLLLWEGSIAPEVEEIWVNKTGIELDKVFI
DSDNQRDKILYQRKTSNIDIVVIDSASQQELKENNIISDLSTLNHRSDMDKRWLNACGTH
SIPYFWGTVGLVYRKDKFPTPPTSWASITEPADNIRGHIGLTNSLIETFMPYLLAKGYPI
DADEKEVLKTTFTYIISNISDILTFEYPLTFIESSATDNELYIALSYSGDQYYLSEKGEY
EWGYTIPKEGTQLWVDCLTVMEHSKHKKEARQLIEFLSRPDIAALNTLYVEVATPNLSAI
KQMPKEFTNDNTLFPPQEIINNSTFNISLDHKQNQIRSRMLRTILKQHESK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttataactctcagtacttttgccttactgtctttaagcttagcatctagtgct
atagcttccagcaagcaaaattcatcgcttactcttttactttgggagggcagtattgca
cctgaagtagaagaaatttgggtaaataaaacaggcattgaactcgataaagtattcatt
gatagtgataatcaacgtgacaaaatcctatatcaaagaaaaacaagtaatattgatatt
gtggtgattgacagtgcttcacagcaggagctaaaagaaaacaatataattagtgaccta
tcaacattgaatcacagaagtgatatggataaacgctggctaaatgcttgtggtactcat
tccattccctatttttggggaacagtaggattagtctatagaaaagataaatttccaacg
cccccgacatcatgggcaagtattactgagcctgctgacaatatccgtggtcatattggt
ttaactaactcattaattgaaaccttcatgccttacttattggcaaaaggataccctatt
gatgcagatgaaaaagaggtattaaaaacaacgttcacatatattatctcgaatatttca
gatattttaaccttcgaataccctttaacatttattgaatcttctgcgacggataatgaa
ctttacattgcattatcctacagtggtgatcagtattacttatctgaaaagggagagtat
gagtggggctacacgatcccaaaagaaggaacccagctctgggtcgattgcttaactgtc
atggagcactctaaacataaaaaagaagcaaggcagttaattgagtttttaagtcgtcca
gatatcgcagcactgaatacattgtatgtggaagttgccacaccaaacttaagcgcaata
aaacaaatgccaaaagagtttactaacgacaacactctttttccacctcaagagatcatt
aacaacagtacatttaatatctcattagatcataaacaaaaccaaattcgcagtcgaatg
ttgcgaacaattttaaagcagcatgaatctaaataa
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