Aliivibrio wodanis: AWOD_I_0919
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Entry
AWOD_I_0919 CDS
T03808
Symbol
uvrB
Name
(GenBank) UvrABS system protein B (excinuclease ABC subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
awd
Aliivibrio wodanis
Pathway
awd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWOD_I_0919 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
awd03400
]
AWOD_I_0919 (uvrB)
DNA repair and recombination proteins [BR:
awd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWOD_I_0919 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWOD_I_0919 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
UB2H
Motif
Other DBs
NCBI-ProteinID:
CED71012
UniProt:
A0A090IL31
LinkDB
All DBs
Position
1:1081539..1083569
Genome browser
AA seq
676 aa
AA seq
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MANTYELMSNYQPAGDQPQAIKTLNEGLENGLAHQTLLGVTGSGKTFTLANVIAKSGRPT
VIMAHNKTLAAQLYGEMKAFFPNNAVEYFVSYFDYYQPEAYVPTTDTFIEKDSSVNEHIE
QMRLSATKALLERKDAIIIASVSAIYGLGDPQAYLSMMLHLRRGDVVNQRDLLRRLAELQ
YKRNDMAFERGTFRVRGEVLDVFPAESEHEAIRIELFDDEVERISKFDPLTGSIITKDMP
RCTIYPKTHYVTPREKVLEAIDQIKVDLAERQKELLANNKLVEEQRITQRTQFDIEMMNE
LGFCSGIENYSRYLSGRPQGEAPPTLFDYLPKDGLLIIDESHITVSQIGAMYKGDRSRKE
NLVEYGFRLPSALDNRPMRFDEFEALAPQTIYVSATPGKYEIEKSGTDIAEQLVRPTGLL
DPIIEVRPVGTQVDDLLSEIRIRTKVGERVLVTTLTKRMAEDLTEYLAEHEVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNLEGKAILYADKMTGSMEKAIGETERRREKQILHNKALGIVPTALKKDVADILEL
GDMTKNKRKVVAPKIKLSEVAEEGANYRSMTPQQLDKEVKKLETKMYQHAKDLEFELAAQ
VRDEIETLRGQFITNS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggccaatacgtatgaattaatgtctaattatcagccggcaggtgatcaacctcaagcg
ataaaaacgttgaatgaaggtttagagaatggtcttgctcatcaaacccttcttggagtg
actggttcaggaaaaacgttcacattagccaatgtgatagctaaatctggtcgtccgacg
gtgatcatggctcataacaagacattagcggctcagttatatggagaaatgaaagctttt
ttcccaaataatgccgttgaatattttgtgtcatactttgattattatcaaccagaagct
tatgtaccgaccacagatacctttattgaaaaagattcctcagtaaatgaacatatcgaa
caaatgcgtttatcagcaacgaaagctcttttagaacgtaaagacgcgattattattgct
tccgtttctgctatttatggtttaggtgaccctcaagcctatttaagcatgatgcttcat
ctacgacgtggagatgttgttaaccaaagagatcttttacgtcgcttagctgaactgcaa
tataaacgtaatgacatggcgtttgaacgaggtactttccgcgtccgtggtgaggtgttg
gacgtttttcctgctgagtccgagcatgaagcgattcgaattgaattgtttgatgatgag
gtagagcgtattagtaaatttgacccattaacgggctctattattacgaaagatatgcct
cgctgtactatttatcctaagacgcactacgtaacaccaagagaaaaggtacttgaagcg
attgatcaaataaaagtcgatctggctgaacgtcaaaaagaactactggcgaataataaa
ttagtagaagagcaacggattactcagcgtactcagtttgatattgaaatgatgaatgaa
ttaggtttttgttctggtatcgaaaactactctcgttatttaagtggtcgacctcaaggt
gaagcgccaccaacgttattcgattatttaccaaaagatggcttgttgatcattgatgag
tctcacattacagtctcccaaattggtgctatgtataaaggtgatcgctcacgtaaagaa
aacttggtggaatatggttttcgacttccatcagcattagataataggccaatgcgtttt
gacgaatttgaagcgttagctccacaaaccatttatgtttctgctactcctggtaagtat
gaaatagaaaaatcaggaacagatatcgcagagcaattggtaaggccaacaggtttactt
gatccaataattgaagtgcgtccagtcggaacacaagtagatgatcttttatctgaaata
cgaattagaacaaaagtgggagagcgtgtcttagttacaacattaactaagcgaatggca
gaagatttaaccgaatatcttgcagagcatgaggtcaaagtacgttatttacattcggat
attgatacggttgaacgtgtcgaaattattcgtgatttacgtttaggggagtttgatgta
cttgttggtatcaacttacttcgtgaaggtttagatatgcctgaggtgtctttggttgcg
attttagatgcagataaagaaggttttttacgttcagaacgctcattaattcaaacgata
ggtcgcgctgctcgtaatttggaaggcaaagcgattctttatgcagataaaatgacaggt
tcaatggaaaaagcgataggtgaaacagaaagacgacgtgaaaaacagatcttacacaat
aaagctttagggatagtacctacggcattgaaaaaagacgttgcggatattctagagtta
ggtgatatgactaagaacaaacgtaaagtagttgcacctaaaattaaactgtctgaggtt
gcagaagaaggtgcgaattatcgttctatgacgccacagcaattagataaagaagttaaa
aaattagaaacgaaaatgtatcaacatgcgaaagatttggaatttgaattggctgcacaa
gtgagagatgaaatagagactttaagagggcaattcataaccaatagttaa
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