Aliivibrio wodanis: AWOD_I_1157
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Entry
AWOD_I_1157 CDS
T03808
Symbol
sbcD
Name
(GenBank) nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
awd
Aliivibrio wodanis
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
awd03400
]
AWOD_I_1157 (sbcD)
DNA repair and recombination proteins [BR:
awd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AWOD_I_1157 (sbcD)
Archaeal homologous recombinant proteins
AWOD_I_1157 (sbcD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
dDENN
PRORP
Motif
Other DBs
NCBI-ProteinID:
CED71241
UniProt:
A0A090IKP0
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All DBs
Position
1:1341303..1342547
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AA seq
414 aa
AA seq
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MRILHTSDWHLGQNFFTKSRRNEHQKFISWLLEQVQENAINAVIIAGDVFDTGAPPSYAR
EMYNQFVVEMNKVNCELIVLGGNHDSVSTLNESKQLLAHLNARVIANTNDDLSTQLLTLP
NSDGSVGAILCAVPFIRPRDVVTSVAGSTGVEKQQALGEAIKQHYHQLYQKALELRSELD
LDVPIIATGHLTALGVKQSDSVRDIYIGTLDGFAADGFPPADYIALGHIHRPQLVAKSDH
IRYSGSPIPLSFDELKSQKQVVMVEFNKASLTQITPINVPMFQQMKALKGDLETIEQELA
QFKECEETTWLCIEVEVQDYLSDLQQRIQALTQDLNVEVLQLRRARNRSEQTLAQEKTET
LAELTPFDVFTKRIEQETFETEKEQQRAERMTTKFKQILSEVEHKDTDLQEGDA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattttacatacttctgattggcacctaggtcaaaatttcttcacaaaaagccgc
cgtaatgagcatcaaaaattcattagctggctacttgaacaagtccaagaaaatgccatt
aatgcggttatcattgccggagatgtatttgatacgggcgcgccaccaagttacgcgcgt
gaaatgtacaaccagtttgtggtggagatgaacaaagtaaactgcgaattgatcgtgctt
ggtggaaatcatgattctgtgtcgacactcaatgaatcaaaacaactgttagcacattta
aacgcacgagtaattgctaataccaatgatgatttatcgactcaattattaacactccca
aacagtgacggttctgtcggtgctattttatgcgcggttccgtttatacggccacgtgac
gttgtcactagtgtggcgggctcaacgggtgtagagaagcaacaagcactcggcgaagcg
atcaagcagcattatcatcaactgtatcaaaaagcgctagaactaagatctgagttagat
cttgatgtacctattattgctacgggtcacttgacggcacttggtgttaaacaatcagat
tcagttcgtgatatctacattggcacattggatggctttgctgccgatggttttccgcct
gctgattacatcgcattaggtcatattcaccgcccgcaattggtggctaaatctgatcat
attcgctattcaggctcgccaatcccattaagttttgatgagcttaaatctcaaaaacaa
gtggtgatggttgagtttaataaagcgagcctaactcaaatcacaccgattaatgtccct
atgtttcaacaaatgaaggcattaaaaggcgatttagagacaatagagcaagaattagcg
caatttaaagagtgcgaagaaactacgtggttatgcattgaagtcgaagttcaagattac
ttatccgatctacaacaacgcattcaggcactaactcaagatcttaatgttgaggtgttg
caactgcgtcgagcgagaaaccgcagtgaacaaaccttagcgcaagaaaaaacagaaacg
ctagcggagttaacgccttttgatgtgtttactaaacgtatagagcaagagacgtttgaa
acagaaaaagagcagcaacgcgcagaacgaatgacaaccaagtttaagcagattttgtca
gaagttgaacataaagataccgatttacaagaaggtgatgcatga
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