Aliivibrio wodanis: AWOD_I_1902
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Entry
AWOD_I_1902 CDS
T03808
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
awd
Aliivibrio wodanis
Pathway
awd04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AWOD_I_1902 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
awd03016
]
AWOD_I_1902 (trmU)
Enzymes [BR:
awd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
AWOD_I_1902 (trmU)
Transfer RNA biogenesis [BR:
awd03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
AWOD_I_1902 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Asn_synthase
DUF7411
ATP_bind_3
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
CED71967
UniProt:
A0A090IN81
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All DBs
Position
1:2195341..2196465
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AA seq
374 aa
AA seq
DB search
MSDNSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNEEYCTAAEDLADAQ
AVCDKLGIHLHTINFASEYWDNVFEYFLEEYKAGRTPNPDILCNKEIKFKAFLEFADEVL
DADFIAMGHYVRRTFPSAEEIANGAKPEMLRGLDSNKDQSYFLYTLSSDQVSRSLFPVGE
LEKPEVRRIAEEQDLITAKKKDSTGICFIGERKFTEFLGKYLPAQPGNIETPEGNIIGQH
QGLMYHTLGQRKGLHIGGSKGGGGNEDPWFVGEKDLKRNVLIAVQGKDHPLLKSQGLLAS
QLHWVDRTPIKAPLSCTVKTRYRQTDIPCTIIPIDDENIKVIFDEAQIAVTPGQSAVFYS
GEICLGGGIIEERI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaacagccaaaagaaagtcatcgtcggtatgtccggtggtgtagattcttca
gtatcagcctatctacttcagcaacaaggataccaagttgaaggtcttttcatgaaaaac
tgggaagaagatgacaacgaggaatattgtaccgctgccgaagatttagccgatgcacaa
gcggtgtgtgacaaattaggtattcaccttcacaccattaactttgcatctgaatactgg
gacaacgtttttgaatatttcttagaggaatacaaagcgggccgtacgccaaatcctgat
attttatgtaataaagaaatcaaatttaaagctttcttagaatttgctgatgaagtacta
gatgcagatttcattgctatgggccactacgttcgtcgtactttcccaagcgcagaagaa
atcgcaaatggtgcaaaaccagaaatgcttcgtggtttagattcaaacaaagatcaaagc
tacttcctatacacattaagctcagatcaagtatctcgcagcctattccctgttggtgag
cttgaaaaacctgaagtacgccgcattgctgaagagcaagatttgatcacagcgaagaaa
aaagattctactggtatttgttttattggtgaacgtaaatttactgaatttttaggcaaa
tacttaccagcacaaccaggtaatatcgaaaccccagaaggtaacatcattggtcaacac
caaggtttgatgtaccacactttaggtcaacgtaaagggttacacatcggtggctctaaa
ggcggcggcggtaacgaagacccatggtttgttggtgaaaaagatttaaaacgtaatgtg
ttaattgccgttcaaggtaaagaccacccattactaaaatctcaaggcctattagcttct
caactacactgggttgatcgcactccgattaaagccccattgagctgcacggtgaaaaca
cgttaccgtcaaactgatatcccttgtaccatcatccctattgatgatgaaaacattaaa
gtgatttttgatgaagcacaaattgcagtgactccaggtcagtctgctgttttctactca
ggtgaaatttgcctaggtggcggcatcatcgaagagcgtatttaa
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