Aliivibrio wodanis: AWOD_I_1953
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Entry
AWOD_I_1953 CDS
T03808
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar regulon FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
awd
Aliivibrio wodanis
Pathway
awd02020
Two-component system
awd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AWOD_I_1953 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AWOD_I_1953 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
awd03021
]
AWOD_I_1953 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
awd02035
]
AWOD_I_1953 (fliA)
Transcription machinery [BR:
awd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AWOD_I_1953 (fliA)
Bacterial motility proteins [BR:
awd02035
]
Flagellar system
Flagellar assembly proteins
Stator
AWOD_I_1953 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
CED72018
UniProt:
A0A090IRP5
LinkDB
All DBs
Position
1:complement(2251914..2252645)
Genome browser
AA seq
243 aa
AA seq
DB search
MSNSLTYDHKGNVNSQKAFLERYSSLVKRIAHHLMARLPASVLVDDLIQAGMIGLLEAQQ
NYDGSKGASFETYAGIRIRGSMLDEIRRGDWVPRSVHKNGRMINSAIKELEAKLYRDPTD
KEIADYLELSLDQYYQILKDVNCGKLVGMEDLGVSDDVITTEEQMNDNIPFQGVADEHFR
VALVEAIKTLPEREALVLSLYYDEELNLKEIGAVIGVSESRVSQIHSQSMQRLRAKLSSW
TVE
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatagcttaacttatgatcataaaggcaatgtaaatagtcaaaaggcattttta
gagcgttactctagcttagttaagcgaattgcacatcatttaatggcaagattaccagca
agtgttcttgttgatgatttaattcaagctggaatgattggtcttcttgaggctcagcag
aattatgatggaagcaaaggtgccagttttgaaacctatgcaggtatccgaattcgaggc
tcaatgttggatgaaattcgacgtggcgattgggttcctcgctctgtacataaaaatggt
cggatgataaattcggcaattaaagaacttgaagctaaactttatcgagatcctaccgat
aaagagatagcagactatttagaattatcgttagatcaatattatcagatacttaaagat
gtgaattgcggtaaactagttggtatggaagatttaggtgtttctgatgatgttattaca
acagaagaacaaatgaatgataatattccatttcaaggtgttgctgatgaacattttcga
gttgctcttgttgaagcgattaaaacccttcctgaaagagaagctctagttttatctctt
tattatgatgaagagctaaacttaaaagaaattggtgctgtaattggtgttagcgaatct
cgcgtcagccaaatacacagccaatcaatgcaacgactacgggccaagttatcatcttgg
acagtagaataa
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