Aliivibrio wodanis: AWOD_I_2032
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Entry
AWOD_I_2032 CDS
T03808
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
awd
Aliivibrio wodanis
Pathway
awd00300
Lysine biosynthesis
awd01100
Metabolic pathways
awd01120
Microbial metabolism in diverse environments
awd01230
Biosynthesis of amino acids
Module
awd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AWOD_I_2032 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
awd01002
]
AWOD_I_2032 (dapE)
Enzymes [BR:
awd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AWOD_I_2032 (dapE)
Peptidases and inhibitors [BR:
awd01002
]
Metallo peptidases
Family M20
AWOD_I_2032 (dapE)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CED72097
UniProt:
A0A090INM9
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All DBs
Position
1:2332066..2333199
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AA seq
377 aa
AA seq
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MSDTPTLALAKDLLSRQSVTPEDAGCQELMIKRLEALGFTIEIMVFEDTTNFWARRGTEV
PLFTFAGHTDVVPTGSLDHWNTDPFEPTIIDGMLYARGAADMKGSLACMVIAVERFVSEH
PDHKGSISFLITSDEEGPFINGTTRVVDTLKERNEIIDMCIVGEPSSTDHVGDVVKNGRR
GSLTGNLTVKGIQGHVAYPHIARNPIHQAMPVLTELATTEWDKGNDYFPPTSFQIPNING
GTGASNVIPGDLEVMFNFRFSTESTVEGLQQRVIDTLNKHDLEYDLDWIINGLPFLTDTG
DLLTAVVDAVDTVNQQKPQLLTTGGTSDGRFIAQMGSQVIELGPVNATIHKVNECVKVDD
LEKLTDMYQEVLNNLLA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaccccaacattagcgcttgctaaagatctattaagccgtcaatccgttacc
cctgaagatgctggttgccaagagcttatgattaaacgcttagaagcacttggctttact
attgaaatcatggtttttgaagatacaactaacttttgggcccgccgtggtacagaagta
cccttgtttacttttgcaggtcacactgatgtcgttcctactggatcattagatcattgg
aatactgatccgtttgaaccaacgattattgatggcatgctatacgctcgtggtgctgct
gatatgaagggttctttggcttgtatggttattgctgttgagcgctttgtttctgaacac
ccagatcataaaggttcgatttcttttttaatcacatccgatgaagaaggtccattcatt
aatgggacaactcgtgttgttgatacactaaaagagcgtaatgaaattattgatatgtgt
attgtaggtgagccatcaagcactgatcatgttggtgatgtcgtgaaaaatggtcgtcgc
ggctctcttactggtaatctaaccgttaaaggaattcaaggtcacgttgcctatccacat
atcgctcgaaatcctattcatcaagcaatgccagtattaactgaattagctacgactgaa
tgggataaaggcaatgattacttccctccaactagcttccaaattccaaatatcaatggc
ggtactggtgcgtcaaatgtgatccctggcgatctcgaagtaatgtttaactttcgcttt
agtacagagtcaacagtagaaggcttacaacagcgcgttatcgatacattaaataaacac
gatttagagtatgacttagattggatcattaatggcctgccatttttaactgatactggc
gatctactcactgccgttgtcgatgctgttgatacggttaatcagcaaaaacctcaacta
ttaaccaccggtggtacatctgatggacgcttcattgcacaaatgggatctcaagttatt
gagcttggacctgtcaatgcaactattcataaagtaaatgaatgcgttaaagtagatgat
ttagaaaagctgacagatatgtatcaagaagtacttaataatttacttgcctaa
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