Aliivibrio wodanis: AWOD_I_2151
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Entry
AWOD_I_2151 CDS
T03808
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
awd
Aliivibrio wodanis
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
awd03016
]
AWOD_I_2151 (truD)
Enzymes [BR:
awd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AWOD_I_2151 (truD)
Transfer RNA biogenesis [BR:
awd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AWOD_I_2151 (truD)
Prokaryotic type
AWOD_I_2151 (truD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CED72213
UniProt:
A0A090ISF6
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All DBs
Position
1:complement(2462075..2463121)
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AA seq
348 aa
AA seq
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MSDIMSNFSWLYGKPVATGKLKQLPEHFIVKEVLGFSFTGKGEHLMVKIRKTGENTKYVA
NELAKFCGVKSKDISWAGLKDRHAVTEQWLSVHLPKSDHLKFALFEATHPGVEILEMTRH
NKKLRPGDLLGNSFQLIATEVTDMDDVLARLEKVKVSGVPNYFGSQRFGHEGNNVTEARR
WGRENVRTRDNTKRSFYLSAARSWIFNHIVSQRITEGYFSQPVDGDILLDRSDRIVNENV
TSEENIQKIQSGELSISAALAGDNQLPTTDTALALEQPNLDAEPDLMALICGNRMRHERR
SVELHPDNLTWSSEGDTLTLNFSLTSGSFATVIVRELLQEIEVERTYE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacatcatgtctaatttttcgtggttatacggaaagccagtagcaacaggtaaa
ttaaagcaactgccagaacatttcattgtaaaagaagtgctcggtttttcgttcactggt
aaaggtgagcatctaatggttaagatccgtaaaacgggtgaaaataccaaatatgttgcc
aatgaattagctaaattttgtggtgtaaaatcaaaagacatcagttgggctggtttaaaa
gatcgtcatgctgtgactgaacaatggttaagcgttcatttaccaaaaagtgatcatctt
aagtttgctttgtttgaagccactcatcctggtgttgaaattttagaaatgacgcgccac
aacaaaaaattgcgtccaggtgatcttctaggaaatagcttccagttaatagcgaccgaa
gtaactgacatggacgatgtattagctcgtttagagaaagtcaaagtatctggggtgcct
aactattttggttcacaacgttttggtcatgaaggtaataacgtgaccgaagcacgccgt
tggggtcgtgaaaatgtgcgtactcgtgataatactaagcgtagcttctatttatccgct
gcgcgttcttggatctttaaccatattgtttctcaaagaataacagagggttacttctct
caacctgttgatggtgatattcttctagatcgttcagatcgtatcgttaatgagaatgta
acctcagaagagaacattcaaaaaattcagagtggtgaattatcaatcagtgcggcatta
gctggtgataatcaattaccaacgacagatacagcgctagcattggaacagccaaactta
gatgctgaacctgatttaatggcgctgatctgtggtaaccgcatgcgtcatgaacgtcgc
agtgttgaattacatcctgataacctcacttggtcttctgagggtgatacgttaacgctg
aatttctctttaacatcaggcagttttgcaacggtaattgtccgtgagttattgcaagaa
attgaagtagaaagaacgtacgaataa
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