Aliivibrio wodanis: AWOD_I_2229
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Entry
AWOD_I_2229 CDS
T03808
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
awd
Aliivibrio wodanis
Pathway
awd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWOD_I_2229 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awd03019
]
AWOD_I_2229 (rppH)
Messenger RNA biogenesis [BR:
awd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AWOD_I_2229 (rppH)
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GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
CED72289
UniProt:
A0A090KL78
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Position
1:complement(2552915..2553427)
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AA seq
170 aa
AA seq
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MIDGDGFRPNVGIVICNSHGQVFWAKRYGQHSWQFPQGGIDDGETPEQAMYRELYEEVGL
TKNDVRILASSRHWLRYKLPKRLVRWDSKPVCIGQKQKWFLLRLECDESKVNMQRDRSPE
FDGWRWVSYWYPVRQVVSFKRDVYRRALKEFAVIAMPFKERKFKRKGKKG
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatggcgatggtttccgcccgaacgtcgggatagtgatatgcaatagccatggt
caagtattctgggcgaaacgatacggacagcattcgtggcaatttccacaaggtggtatt
gatgatggtgagactccagagcaagccatgtaccgtgagttgtatgaagaagttggccta
acaaaaaatgatgtacgtattttagcaagcagccgacattggctacgatataaattaccg
aagcgtttagttagatgggattcaaaacccgtttgtatcggacaaaaacagaagtggttt
ttgttgcgcttggaatgtgatgagtccaaggtgaatatgcaaagagatcgctcgcctgaa
tttgatggctggcgatgggtaagttattggtacccagtaagacaagtagtttcatttaag
cgtgatgtttatcgccgagcactgaaagagtttgcggtgatcgccatgccgtttaaggaa
cgcaaatttaaaaggaaaggtaaaaaaggttaa
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