Aliivibrio wodanis: AWOD_I_2308
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Entry
AWOD_I_2308 CDS
T03808
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
awd
Aliivibrio wodanis
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awd03019
]
AWOD_I_2308 (cafA)
03009 Ribosome biogenesis [BR:
awd03009
]
AWOD_I_2308 (cafA)
Messenger RNA biogenesis [BR:
awd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AWOD_I_2308 (cafA)
Ribosome biogenesis [BR:
awd03009
]
Prokaryotic type
rRNA processing factors
AWOD_I_2308 (cafA)
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Ortholog
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GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
zf-LYAR
Motif
Other DBs
NCBI-ProteinID:
CED72366
UniProt:
A0A090IN67
LinkDB
All DBs
Position
1:complement(2631392..2632861)
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AA seq
489 aa
AA seq
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MSTELLINVTPSETRVAMIEAGVLQEIHVEREARRGIVGNIYKGRVSRVLPGMQAAFIDI
GLDKAAFLHASDIVPHTECVSENEKRQFQVRDISQLVHQGQDLVVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESEKERNRLKNTVSDYCDEFGGFIIRTAAEGASEA
EISQDAAFLKRLWHKVIERRKKSKTKSMLYGELGLDQRILRDFVGTELDLIRVDSKLAFE
KLKQFTTEFVPELTKKLEYYSGDKPIFDMYETENEIQRALDRKVELKSGGYLIIDQTEAM
TTVDINTGAFVGRRNLEETIFNTNVEATQAIARQLRLRNLGGIIIIDFIDMLSEEHRRRV
LQSLGSALEKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCGQCPTCEGRGAVKTVESV
CYEVLREITRVNRAYDSDKFVVYASVAVADALEGEESHALAELELFIGKQVKIQAEPLYI
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagagttgttaataaacgtaacgccgagtgaaactcgagttgcgatgattgaa
gccggtgtgcttcaagagatccatgtagaaagagaagcacgacgtggtattgtgggtaat
atatacaaaggccgagtaagccgagtattgccggggatgcaagcggcgtttattgatata
ggtttggataaagccgcatttctgcacgcctcagacattgttcctcatacggaatgtgtt
tctgagaatgaaaaacgccagtttcaggtgagagatatttctcaattagtacaccaaggg
caagatctggtggtacaagttgttaaagatccgcttggaacgaaaggtgctcgtcttact
actgacataactcttccttcgcgctatttggtatttatgccaggggctagtcatgttggt
gtttctcagcgcattgaaagtgaaaaagaacgtaatcgtttaaaaaatacggtttctgat
tattgtgatgagtttggcggttttattattagaactgcagcagaaggtgcaagtgaagct
gaaatttcacaagatgcagctttcttaaagcgtctatggcacaaggttatagagcgtcgt
aaaaagagcaaaactaaatctatgttgtatggggagttaggtttagatcaacgtatccta
cgtgactttgtgggaacagaactagatttaatccgtgttgactcgaagttagcttttgaa
aagttaaagcaatttacaactgaatttgtacctgaattaactaagaagcttgagtattac
tcgggtgacaaacctatctttgacatgtacgaaactgagaatgaaattcaacgtgcactt
gatcgaaaagttgaactcaagtctggtggatacctgatcatagatcaaacagaagcaatg
acaacggttgatattaatactggtgcgtttgttggtcgtcgtaatttagaagagaccatt
tttaacactaacgttgaagcgacacaagccattgctcgtcaactgcgtctacgtaacctt
ggtgggatcattattattgatttcattgatatgcttagtgaagagcatcgtcgacgtgta
ttacagtcgttagggtcagcattagagaaagatcgtgtaaaaaccaatattaatggattc
acacaacttggcttggttgaaatgactcgaaaacgcactcgagaaagtattgagcatgtt
ttgtgtggtcaatgccctacatgtgaaggccgaggcgcagtgaaaaccgttgagagtgtt
tgctatgaggttttacgtgaaataacacgagtaaaccgagcctatgattcagataagttt
gtagtttatgcttcggtagcagtagcggatgcacttgaaggtgaagaatctcatgcttta
gctgaactcgaactatttattggaaaacaggtaaaaattcaggctgaacctctgtatatt
caagagcagtttgatgttgtaatgatgtag
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