KEGG   Aliivibrio wodanis: AWOD_I_2308
Entry
AWOD_I_2308       CDS       T03808                                 
Symbol
cafA
Name
(GenBank) ribonuclease G
  KO
K08301  ribonuclease G [EC:3.1.26.-]
Organism
awd  Aliivibrio wodanis
Brite
KEGG Orthology (KO) [BR:awd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:awd03019]
    AWOD_I_2308 (cafA)
   03009 Ribosome biogenesis [BR:awd03009]
    AWOD_I_2308 (cafA)
Messenger RNA biogenesis [BR:awd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AWOD_I_2308 (cafA)
Ribosome biogenesis [BR:awd03009]
 Prokaryotic type
  rRNA processing factors
   AWOD_I_2308 (cafA)
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1 zf-LYAR
Other DBs
NCBI-ProteinID: CED72366
UniProt: A0A090IN67
LinkDB
Position
1:complement(2631392..2632861)
AA seq 489 aa
MSTELLINVTPSETRVAMIEAGVLQEIHVEREARRGIVGNIYKGRVSRVLPGMQAAFIDI
GLDKAAFLHASDIVPHTECVSENEKRQFQVRDISQLVHQGQDLVVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESEKERNRLKNTVSDYCDEFGGFIIRTAAEGASEA
EISQDAAFLKRLWHKVIERRKKSKTKSMLYGELGLDQRILRDFVGTELDLIRVDSKLAFE
KLKQFTTEFVPELTKKLEYYSGDKPIFDMYETENEIQRALDRKVELKSGGYLIIDQTEAM
TTVDINTGAFVGRRNLEETIFNTNVEATQAIARQLRLRNLGGIIIIDFIDMLSEEHRRRV
LQSLGSALEKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCGQCPTCEGRGAVKTVESV
CYEVLREITRVNRAYDSDKFVVYASVAVADALEGEESHALAELELFIGKQVKIQAEPLYI
QEQFDVVMM
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgagtacagagttgttaataaacgtaacgccgagtgaaactcgagttgcgatgattgaa
gccggtgtgcttcaagagatccatgtagaaagagaagcacgacgtggtattgtgggtaat
atatacaaaggccgagtaagccgagtattgccggggatgcaagcggcgtttattgatata
ggtttggataaagccgcatttctgcacgcctcagacattgttcctcatacggaatgtgtt
tctgagaatgaaaaacgccagtttcaggtgagagatatttctcaattagtacaccaaggg
caagatctggtggtacaagttgttaaagatccgcttggaacgaaaggtgctcgtcttact
actgacataactcttccttcgcgctatttggtatttatgccaggggctagtcatgttggt
gtttctcagcgcattgaaagtgaaaaagaacgtaatcgtttaaaaaatacggtttctgat
tattgtgatgagtttggcggttttattattagaactgcagcagaaggtgcaagtgaagct
gaaatttcacaagatgcagctttcttaaagcgtctatggcacaaggttatagagcgtcgt
aaaaagagcaaaactaaatctatgttgtatggggagttaggtttagatcaacgtatccta
cgtgactttgtgggaacagaactagatttaatccgtgttgactcgaagttagcttttgaa
aagttaaagcaatttacaactgaatttgtacctgaattaactaagaagcttgagtattac
tcgggtgacaaacctatctttgacatgtacgaaactgagaatgaaattcaacgtgcactt
gatcgaaaagttgaactcaagtctggtggatacctgatcatagatcaaacagaagcaatg
acaacggttgatattaatactggtgcgtttgttggtcgtcgtaatttagaagagaccatt
tttaacactaacgttgaagcgacacaagccattgctcgtcaactgcgtctacgtaacctt
ggtgggatcattattattgatttcattgatatgcttagtgaagagcatcgtcgacgtgta
ttacagtcgttagggtcagcattagagaaagatcgtgtaaaaaccaatattaatggattc
acacaacttggcttggttgaaatgactcgaaaacgcactcgagaaagtattgagcatgtt
ttgtgtggtcaatgccctacatgtgaaggccgaggcgcagtgaaaaccgttgagagtgtt
tgctatgaggttttacgtgaaataacacgagtaaaccgagcctatgattcagataagttt
gtagtttatgcttcggtagcagtagcggatgcacttgaaggtgaagaatctcatgcttta
gctgaactcgaactatttattggaaaacaggtaaaaattcaggctgaacctctgtatatt
caagagcagtttgatgttgtaatgatgtag

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