Aliivibrio wodanis: AWOD_I_2609
Help
Entry
AWOD_I_2609 CDS
T03808
Symbol
rsmB
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
awd
Aliivibrio wodanis
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
awd03009
]
AWOD_I_2609 (rsmB)
Enzymes [BR:
awd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
AWOD_I_2609 (rsmB)
Ribosome biogenesis [BR:
awd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AWOD_I_2609 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
FtsJ
Methyltransf_25
Methyltransf_31
Methyltransf_37
Methyltransf_5
Cons_hypoth95
MTS
Methyltransf_15
TRM5-TYW2_MTfase
TrkA_N
SH2_1
Motif
Other DBs
NCBI-ProteinID:
CED72660
UniProt:
A0A090IW94
LinkDB
All DBs
Position
1:2970536..2971816
Genome browser
AA seq
426 aa
AA seq
DB search
MNVRAAAAKVIYQVVDQGHSLSSALPKAQAEIKPRDQALLQEICYGVLRFLPRLESVAQS
LMDKPLKGKQRVFHHLILVGIYQLSFMRIPAHAAVGETVEGTKNLKGPKLRGLINGVLRS
YQRNQEELDAKSISHDSGKYGHPGWLLKMLKEAYPDQWESIVEANNNKAPMWLRVNSQHH
TRDEYIALLEKEEIEVTPHSQATDALLLDKARDVFTLPGFEQGWVSVQDAAAQLSAEYLQ
PQDGELILDCCAAPGGKTAHILERTKDTNVVAIDCDETRLTRVYENLERLNLTAKVICGD
ARYPEQWWKGEQFDRILLDAPCSATGVIRRHPDIKWLRRSEDIKALAELQSEIFDAMWLQ
LKSGGTMVYATCSITPQENCDQVKAFLERTENASLVDNTDPAKPGRQILPGEENMDGFYY
AVLQKA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttcgtgctgcggcagcaaaagttatttatcaagttgtcgatcagggtcattct
ctctcttctgcacttccaaaagctcaagccgagataaaacctcgtgatcaggctttactg
caagagatttgttatggcgtattgcgctttcttcctcgtttggaatcggttgctcaatct
cttatggataaaccgctaaaagggaagcaacgtgtttttcaccacctgatcttagtcggt
atttaccaattaagcttcatgcgtatcccagctcatgccgccgttggcgaaacggttgaa
ggcacgaaaaacctaaagggcccaaaattgcgagggttaattaatggcgttcttcgtagc
tatcaacgtaatcaagaagagttggatgccaaatctatcagccacgactctggtaaatat
ggtcaccctggttggttactaaaaatgctaaaagaagcgtacccagaccaatgggaatcg
attgttgaagcaaacaacaacaaggcaccaatgtggttacgcgtaaacagtcagcaccat
actcgcgatgaatacatcgctctacttgaaaaagaagagatcgaagtaaccccacacagc
caagcaaccgacgcattattattagataaagcgcgtgatgtatttacattaccgggcttc
gagcaaggttgggtatcggtacaagatgcagcagctcaactttcagctgagtatttacaa
ccacaagatggtgaactcattcttgattgctgtgctgctcctggtggcaaaactgcacat
attttagagcgaacaaaagacacaaacgttgttgctatcgattgtgatgaaacacgctta
actcgcgtgtacgaaaacttagaacgccttaacttaacagcaaaagttatttgtggtgat
gctcgttatcctgaacaatggtggaaaggcgaacagtttgaccgcattttattagatgcg
ccttgctctgcaacgggtgttattcgtcgtcatccagacatcaaatggttgcgtcgttca
gaagatattaaagcgcttgctgaactgcaaagtgaaatctttgatgcaatgtggctacag
ttaaaatctggcggcaccatggtgtatgcgacgtgttcaatcacaccgcaagaaaactgc
gatcaagtaaaagcctttttagagcgcacagaaaatgcctctttggtggataatactgat
ccagcaaaacctgggcgtcaaattcttcctggtgaagaaaatatggacggcttctattac
gctgttctacaaaaagcataa
DBGET
integrated database retrieval system
