KEGG   Actinomyces weissii: JG540_03890
Entry
JG540_03890       CDS       T07198                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
awe  Actinomyces weissii
Pathway
awe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:awe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JG540_03890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:awe03019]
    JG540_03890
Messenger RNA biogenesis [BR:awe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     JG540_03890
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QQM68318
UniProt: A0A7T7MBD9
LinkDB
Position
944540..946210
AA seq 556 aa
MLKAPGPIPDGALRVVPLGGLGEVGRNMTVFETEGKLLVVDCGVLFPEEDQPGVDLILPD
FDYIRDRLEDVVALVLTHGHEDHIGAVPYLLRLRPDIPLVGSELTLAFVDAKLKEHRIRP
VLHEVKELQEVSYGPFDLEFVAVNHSIPDAMAVMIRTDAGTALVTGDFKMDSLPIDGRIT
DLRSFARFGEEGVDLFCVDSTNAEVPGMVGHENEIGPVLDNVFADSDQQIVVASFASHVH
RVQQVLDAADAHGRRVALIGRSMVRNMGIAAERGYLKVPQGVLVDARDISSLPPGERVLM
ATGSQGEPMAALSRMAHGEHKSISLEPGDTVIFASSLIPGNENSVFRVINQLMRLGARVV
HQGNAKVHVSGHASSEELLHVYNIVQPANVMPIHGEVRHLVANGALAVKTGIAPERVMLC
EDGVVVDLLDGQARIAGAVPCGYVYVDGSSVGEIDETELKDRRILAEEGFVSVYAVVETK
TGTILAGPHIQARGVAEDDAVFDEVLPDLTASLAQALDSGNASAHSLQQVLRRTLGRWVG
RRLRRRPMIVPVVIEA
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgcttaaggcccccggtccgatcccagatggcgcgctgcgcgtggtgcccttgggcggc
ctgggcgaggtcggccgcaacatgaccgtcttcgagaccgagggaaagctcctggtggtc
gactgcggcgtgctcttcccggaggaggaccagcccggcgtcgacctgatcctgccggac
ttcgactacatccgggaccgcctggaggacgtggtcgccctggtgctcacccacgggcac
gaggaccacatcggcgccgtcccctacctgctgcgcctgcgcccggacatccccctggtg
ggcagcgagctgaccctggccttcgtggacgccaagctcaaggagcaccggatccgtccc
gtgctgcacgaggtcaaggagctccaggaggtcagttacggtccctttgacctggagttc
gtggccgtcaaccactccatccccgacgccatggccgtgatgatccgcactgacgcgggc
accgccctggtcaccggcgacttcaagatggactccctgcctattgacgggcgcatcacg
gacctgcgctccttcgcccgcttcggggaggagggcgtggacctgttctgcgtggactcc
accaacgcggaggtccccggcatggtgggccacgagaacgagatcgggccggtgctggac
aacgtcttcgccgactccgaccagcagatcgtggtggcctctttcgccagccacgtgcac
cgggtccagcaggtgctcgacgccgcggacgcccacggccgtcgcgtggccctgatcggc
cgctcgatggtccgcaacatggggatcgctgcggagcgcggctacctcaaggtccctcag
ggcgtgctggtggacgcccgggacatctcctccctgcccccgggcgagcgtgtgctcatg
gccaccggcagccagggggagcccatggcggccctgtcccgcatggcccacggggagcac
aagtccatcagcctggagccgggggacaccgtcatcttcgcctcctcgctgatccccggc
aacgagaactccgtgttccgggtcatcaaccagctcatgcgtctgggggcccgcgtggtg
caccagggcaacgccaaggtgcacgtctcgggccacgcctcctccgaggagctcctgcac
gtctacaacatcgtccagcccgccaatgtcatgccgatccacggggaggtgcgccacctg
gtggccaacggggccctggccgtcaagaccggcatcgcccccgagcgcgtcatgctctgt
gaggacggcgtggtcgtggacctgctggacggccaggcccgtatcgccggggccgtgccc
tgcggctacgtctacgtggacggctcctccgtgggggagatcgacgagaccgagctcaag
gaccgccgtatcctcgccgaggagggcttcgtgtccgtctacgcggtggtggagaccaag
accggcaccatcctggccgggccgcatatccaggcccggggtgtggctgaggacgacgcc
gtgttcgacgaggtgctgccggaccttaccgcctccctggctcaggcgctggactcgggc
aacgcctccgcccactccctgcagcaggtcctgcgccgcaccctgggccgctgggtggga
cggcgcctgcgccgtcggcccatgatcgtgcccgtcgtgatcgaggcctga

DBGET integrated database retrieval system