Acinetobacter wanghuae: GFH30_01690
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Entry
GFH30_01690 CDS
T07048
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
awg
Acinetobacter wanghuae
Pathway
awg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFH30_01690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awg03019
]
GFH30_01690
03009 Ribosome biogenesis [BR:
awg03009
]
GFH30_01690
Enzymes [BR:
awg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
GFH30_01690
Messenger RNA biogenesis [BR:
awg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GFH30_01690
Ribosome biogenesis [BR:
awg03009
]
Prokaryotic type
rRNA processing factors
GFH30_01690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QGA10182
UniProt:
A0A5Q0P0G0
LinkDB
All DBs
Position
complement(368411..371857)
Genome browser
AA seq
1148 aa
AA seq
DB search
MKRMLINATHAEEIRVALVTGQRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANSYYKADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEMLASLNVPRAMSVIVRTAGIGRSQEELQL
DLQHLLDLWAQIQTTASSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPLQLDKLKTYTLNEPLFAHFAIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALSTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKDRNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVQVPVEIAAFLLNEKRHSLVYLEQTSSTRVTVLPHPHLETPHY
EISYNPEGFAPTSYERTEATRSSEKELGYESSEWHLEGEQNVQIAAPAAPAQQSNAKHNN
KRRNNNPNQNQAPQQQVVQQAPAQAQVASSSPCAWLENLFVQKQAATVDQSRTANNAAAA
IEQMVNGGAVSRGQFGQVAAPVAHTAVQPVAAPVQHPVAAPANNAYLAPSTVAHKQERDY
AEKSVEREEKSQRNNKKPRNNKHKEPREQQTVQTETAAPQHQVVEEVVQVSRQEQRQEAR
ENKRNGRRHNNESQQQHHDVQNNEHQAVPRRDRRNQQRPERPTRHRDQSVLNDQAATQPV
QQNAAPVVAEAPAANEKPIRVELVDVPRQDVLKTAMIIDIDQANSEIVALNTAPAAVAPE
VKAAAPAPVIAPEVKPEVAVATHVKTAAPVEPTAAKEDKVVRASNDPRQRRRERRAAQAS
QPQVVQVPPSQVPTLAQYTVGSLIRQVYGEDCSVLIEQFGLLPTFNRALLKFTEQYNASL
KANAVPAEEKKPVTRDVQVTVAKVEAEPAPVLDLTPPKPVSDKRVANDPRERRRLAKLAA
EQALEQAKQAQAETAPTAHVEAPASETAAEATTSTSTVAESAPANVSENVAPVVQEAVIE
ANLAAETPKKAATEPKKATVAATDEASEVTDNSVETEESDAEKAEKSPARPRRPRGRPPK
KANTATES
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgattaatgcaacacatgctgaagaaattcgcgttgcactcgtcact
ggtcagcgtctttacgattttgatttagagaatcgtacccgtgaacaaaaaaaatcgaac
atctataaaggtcacgtcactcgcgttgaaccttctttagaagctgtctttgttgaatat
ggtgcaggtcgtcaaggtttcttgtcgatgcgcgaaattgcaaacagctactacaaagca
gaccctcgccaaacatctaatatccgtgaattgatcactgaaggcactgagcttttggtt
caagtggaaaaagaagaacgtggtaacaaaggcgctgccctttcaacgtttatttcactt
gcaggtcgttatttggttcttatgccaaacaacccaaaaggtggcggtattagtcgtcaa
atttcaggttcagttcgtgaagaattgaaagaaatgttggcgtctttaaatgtacctcgc
gcaatgagcgtgattgtacgtactgcgggtatcggtcgttcacaagaagaacttcaactt
gacctgcaacacttgcttgatctttgggcgcaaatccaaacgactgcaagttctggtcca
tcaccaatgttggttcatcaagaagcaggcgtggtaacacgtgcgattcgtgactatcta
cgtgatgatgttgcagaaatcttaattgattctgagcaagcctataacgaagcatataac
tttgttaaagctgtgatgccgcttcaattagacaaactcaaaacctatacgttgaatgaa
cctttgttcgcgcatttcgcgattgaaagccaaattcaaactgcttatgaacgtgaagtg
aaacttccttcaggcggctcaattgtgattgaccaaactgaagctttggtttcaattgac
atcaactcagcaaaatcaacccgtggtcatgacgtagaagaaactgcgcttagcaccaac
ttagaagctgctgaagaaattgcccgccaattgcgtttacgtgatatcggtggtttagtc
gtgatcgacttcatcgatatgacgaaagatcgcaaccaacgtatggtagaagcgaaactt
cgtgaagcaacacaaagcgatcgtgcccgtatccaattcggtcaattatcacgctttggc
ttaatggaaatgagccgtcaacgcttacgtccttctcttgaagaagcaacaggttatgtc
tgcccacgctgtcatggcacaggtatggtacgtgacttacgctcattgtcactttcgatt
atgcgtaaagtggaagagattgcacttcgtgaacgtcatggtgaagttcaagttcaagtg
cctgttgaaattgcggcattcttattgaatgaaaaacgtcacagcttggtttaccttgag
caaacttcaagcacgcgtgtgactgtacttccgcatccacatttagaaacaccacattac
gaaatctcgtataaccctgaaggctttgcgccaactagctatgaacgtactgaagcaaca
cgttctagcgaaaaagaattgggttatgagtcttctgagtggcatttagaaggtgagcaa
aatgtacaaattgctgcaccggctgcgcctgctcagcaaagcaatgcgaaacataacaac
aaacgtcgcaacaacaatccaaatcaaaaccaagcgccacaacagcaagtcgtacaacaa
gcacctgctcaagcgcaagtggcttcaagcagcccatgtgcatggttagaaaacttgttt
gtacaaaaacaagcggcgactgtagaccaatctcgcactgcaaacaatgcagctgctgca
attgagcaaatggtgaatggcggtgcggtgagccgtggtcagttcggtcaagtagctgca
cctgttgcacatactgctgttcaacctgtggcagcgcctgtacagcaccctgttgctgca
cctgcaaacaatgcgtatcttgcaccatcaacagttgcacataagcaagaacgtgactat
gcagagaaatctgtagagcgtgaagagaaatcacagcgcaacaacaaaaaaccacgtaac
aacaagcacaaagaaccacgtgagcaacaaacggttcaaactgaaacggctgcgccacag
catcaagttgttgaagaagtggttcaggtttctcgtcaagaacagcgtcaagaagcgcgt
gaaaacaaacgtaacggtcgccgtcacaacaacgagtcacaacagcaacaccatgatgtt
caaaacaatgaacaccaagctgtgccacgtcgtgatcgtcgtaatcaacagcgtcctgaa
cgcccaacacgacatcgtgatcaaagcgtgttgaatgatcaagcagcgactcaacctgta
cagcaaaatgctgctccagttgttgcagaagcgcctgctgcaaacgaaaaaccaattcgt
gttgaattggtggatgtaccgcgtcaagacgtgctcaaaactgccatgatcattgatatt
gatcaagcaaacagtgaaatcgttgcactgaacacagcacctgctgccgttgctcctgaa
gtgaaagctgctgctccagcaccagtgattgcaccagaagtaaaacctgaagttgctgtg
gctacccatgtaaaaacagctgctcctgttgaaccaacagctgcaaaagaagacaaggtg
gttcgtgcaagtaacgatccgcgtcaacgtcgtcgtgaacgtcgtgctgcacaagcatca
cagccacaagttgtgcaagtgccaccatcacaagtaccgacgttagcgcagtacacagtc
ggtagcttgattcgtcaggtttacggtgaagattgttcagtactcattgaacagtttggt
ttactcccaaccttcaaccgtgcattgcttaaatttactgagcaatacaatgcaagcttg
aaagcaaatgctgtacctgctgaagagaaaaagccggtgacgcgtgatgttcaagtaact
gttgcaaaagttgaagctgaacctgcaccggttttagacttaacaccgccaaaaccagtg
tcagacaaacgtgttgcaaatgacccgcgtgagcgtcgtcgcctagcaaaattagctgct
gaacaagcacttgagcaagcgaaacaagcgcaagctgaaactgcacctactgcacatgta
gaagcgcctgcttcggaaactgcagcagaagcgacaacatctacgtcaacggttgctgaa
tcagcgcctgcaaatgtaagcgaaaatgttgcacctgttgttcaagaagcagtcattgaa
gcaaacctcgctgctgaaacaccaaagaaagcagccacagagcctaaaaaggcaacggtt
gccgcaactgatgaagcttcagaagtgactgataattcagtagaaactgaagaatcagat
gcagagaaagcagagaaatcccctgctcgtccacgtcgtccacgtggtcgtcctccgaag
aaagccaatactgcaaccgaatcttaa
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