Acinetobacter wanghuae: GFH30_04315
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Entry
GFH30_04315 CDS
T07048
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
awg
Acinetobacter wanghuae
Pathway
awg03030
DNA replication
awg03430
Mismatch repair
awg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
awg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFH30_04315 (dnaQ)
03430 Mismatch repair
GFH30_04315 (dnaQ)
03440 Homologous recombination
GFH30_04315 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
awg03032
]
GFH30_04315 (dnaQ)
03400 DNA repair and recombination proteins [BR:
awg03400
]
GFH30_04315 (dnaQ)
Enzymes [BR:
awg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFH30_04315 (dnaQ)
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
GFH30_04315 (dnaQ)
DNA replication proteins [BR:
awg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFH30_04315 (dnaQ)
RNase H
GFH30_04315 (dnaQ)
DNA repair and recombination proteins [BR:
awg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFH30_04315 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QGA10669
LinkDB
All DBs
Position
complement(946717..948159)
Genome browser
AA seq
480 aa
AA seq
DB search
MSQTITLYVDGACRGNGKEIAVGGWGAYITSGSDEYKIYGGESQTTNNRMELSAAIEGIL
FCPKDAKLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWKELDAACQGREIEWNWIK
GHAGHAGNEMADHLANLGVDLTLEKGEKARHVPTATFSIGSTTDESKKKPEIDWLLDDPF
GMDFIDAESEALVDDASLDALPENEMLEDDALPHAENHDQVTDLNTHTTRVIQGKIHPQI
VITPATLDLHGPRQLILDTETTGFYYQDGDRIVEVGAIEMINRKLTGSSIHIYINPQKPV
GDSENVHGISDEFLKDKPLYSDIADTLFDYLQGAEIIAHNASFDMNFLDMEFTRAGFKAL
SEVCEVTDTLAMARAKHPGQKNSLDALVRRYEIAQRDRTFHGALLDAEILADVYLAMTGG
QVSFDMDALSQSTEQQAGQGPSKIEIDLPVIYASDEELAEHEKWVKQFEEKHGTPCLFSK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagacaatcacactctatgtagacggtgcttgccgcggtaatggtaaagagatt
gccgttggtggttggggtgcgtatatcacgagcggatcagatgaatataaaatttatggt
ggtgaatctcagaccaccaacaatcgaatggaactgagcgcagccattgaaggcattttg
ttctgtcccaaagacgccaagctaattatttggacggactcaaattatgtcaaacaaggc
attaccgaatggattcacggctggaaaaagaaaaactggaaagatgttaaaaacccagat
ctttggaaggaacttgatgctgcctgccaaggtcgtgagattgaatggaattggatcaaa
ggacacgccggtcatgcaggcaatgaaatggcagatcatcttgccaatttaggcgtggat
ttaaccttagaaaaaggtgaaaaagcgcgtcatgtcccaacagcgacattttcaatcggt
agcacgacagatgaatcaaaaaaaaagcctgaaatcgattggttgctagatgatccattt
ggtatggacttcatcgatgccgaaagtgaagcgcttgttgatgacgcaagtctagatgcc
ttacctgagaatgaaatgcttgaagatgacgcattgcctcatgcagaaaatcatgatcaa
gtgacggatctcaatacgcataccacacgtgtcatccaaggaaaaattcatccgcaaatt
gtgatcacccctgcgacattagatttgcatggtccgcgccaactcattctcgataccgaa
accacgggtttctattatcaagatggggatcgcattgtcgaagtgggtgcgattgaaatg
attaatcgcaagctcacaggcagctccattcatatctatattaatccgcaaaaaccggtg
ggtgattctgagaatgtgcatggtatttcagatgagtttctaaaagataaaccgctgtat
agcgacattgctgacacgctgtttgattatctgcaaggcgctgagattattgcgcataac
gccagcttcgatatgaacttcctcgatatggagtttactcgtgcgggctttaaggcactg
tccgaagtttgcgaagtcaccgatactttagccatggcaagagctaagcatcctgggcaa
aaaaattcccttgatgccttagtgcgtcgttatgaaattgcccaacgtgatcgtaccttc
catggtgccttactcgatgctgagattctggcagatgtctatttagccatgactggtgga
caggtttcatttgatatggatgccctgtcacaatcgaccgaacagcaagcaggtcaggga
ccgagtaaaatcgaaattgatttacctgttatttatgcgtccgacgaagagcttgccgaa
catgagaaatgggtcaaacaatttgaggaaaaacatggaactccttgccttttctcaaaa
taa
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