Acinetobacter wanghuae: GFH30_05635
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Entry
GFH30_05635 CDS
T07048
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
awg
Acinetobacter wanghuae
Pathway
awg03030
DNA replication
awg03430
Mismatch repair
awg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
awg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFH30_05635 (dnaE)
03430 Mismatch repair
GFH30_05635 (dnaE)
03440 Homologous recombination
GFH30_05635 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
awg03032
]
GFH30_05635 (dnaE)
03400 DNA repair and recombination proteins [BR:
awg03400
]
GFH30_05635 (dnaE)
Enzymes [BR:
awg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFH30_05635 (dnaE)
DNA replication proteins [BR:
awg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFH30_05635 (dnaE)
DNA repair and recombination proteins [BR:
awg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFH30_05635 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
DALR_1
Motif
Other DBs
NCBI-ProteinID:
QGA10900
LinkDB
All DBs
Position
complement(1225931..1229503)
Genome browser
AA seq
1190 aa
AA seq
DB search
MHFVHLGIHTEFSITESIVRIPELVKAAASQEMPALALTDLSNLHAAVKFYKKCLDKGIK
PILGSEIRLNDAEHRVTLLSMTNTGWRNLTELVSEGYISGQQLDIPCVQKEWILNQHQDL
IVLLGMQSDVGKMLITSNPDKAEPLLQEWVEKFGNRVYLALTRTHRPDEDTFIEEAVKLA
KKYNIGVVAHNDVHFIERDDFEAHEARVCIADGYVLGDNRRPKTYSPEQYFKNAEEMAEL
FSDIPTAIENTFEIAKRCNVTLRLGFNDLPDYPIPEGHTIDTYFAHLSEEGLEERLNFLY
PPEQRGEDWAEIRKPYDERLAFEVKIILDMGFPGYFLIVMDFIQWSKGNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVARTYGRD
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMIPTKPLGLSLLESLEAEPQLKDI
VTNPANPDNDDAAEIWEMALKLEGITRNTGKHAGGVVIAPTKLTDYSAVMCDADGTARVA
QFDKDDVESAGLVKFDFLGLRNLTVIEDAIKHINARPDITDPVDISYIPLDDKAAYDIFA
SANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQFCAGYSLGGADLLRRAMGKKKVEEMIKHRQIFIE
GAAKKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAHYPAEFMAAVMTS
EMQNTDNVVFIIDDCRHNGLQVLPPSINMSLYQFHASDPKTIVYGLGAIKGVGEAAMQSV
IDSRIQDGPFRDIFDFCHRVDLKKINKRTLEALIRAGAMDCLGIERADLMAQLPEAVQAA
DQARQNRETGIMDLFGEVEEVQRKPSKPVKAWSDEVRLKGEKDTLGLYLTGHPIDVYRTE
LKSFVPSPINELTPTRRGVTTVFAGLVVDVANFPNRMMVTLDDGTARIEISTNHERFQRF
KDIVQVDKVVVIEGEIYEREGFDRPLGRLTKAFSLNEIRQKRANSIKITLSPEHLTNTLG
RDLQQILTPYTNIDMCTHIPVVLYLDYPYATTELHLGINWKVAPLDEVLAKFRDYFGKSC
IHIEYQVKSKAAKAVSYQQAKPVDVPPPPANMSMDEALDLYQSESQAQYS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcactttgttcatcttggtattcatacagaattttcgattacagaatctatcgtacgg
atacctgagctcgtcaaagctgcagcaagtcaagagatgcctgcccttgccctgaccgat
ttatctaatcttcatgcggcagttaagttctataaaaagtgcctcgataaaggcattaaa
ccaattttaggttctgaaatccgtctgaatgatgctgaacatcgtgtgacgttgttatct
atgaccaatacaggttggcgtaacctgactgagcttgtctctgaaggctatatttcaggt
caacaactcgatattccttgcgttcagaaagaatggattttgaatcaacatcaagattta
atcgtgctattgggcatgcaatctgatgtcggtaaaatgctcattacctcaaatcccgac
aaagccgaaccgctgttacaagagtgggttgaaaaatttggtaatcgggtttatttagcg
ctgacacgtacgcatcgtcctgatgaagatacttttattgaagaagcggtcaaactcgcg
aaaaaatataatattggtgttgtggcacacaatgatgtgcacttcatcgaacgtgatgat
tttgaagcgcatgaagcgcgcgtatgtattgccgatggttatgtgcttggtgataatcgt
cgtccaaaaacttatagtcctgaacaatattttaaaaatgctgaggaaatggcagaactg
ttttctgacattccgactgccattgaaaacacttttgagattgccaaacgttgtaatgtc
actttacgtttaggttttaatgacttaccggattatccaattcctgaaggccataccatt
gatacctacttcgcgcatttatccgaagaaggtttggaagaacgcttaaactttctttat
ccgcctgaacagcgcggcgaggattgggctgaaattcgtaaaccttacgatgaacgttta
gcattcgaagttaaaattattttggatatgggcttccctggttacttcctcattgtcatg
gactttattcaatggtctaaaggcaacggcgtacctgttggtccgggtcgtggttcgggt
gctggttcactggtcgcgtatagcttaaaaattaccgatcttgatccactccgttacgat
ctactcttcgaacgtttcttaaatcctgaacgtgtttcgatgcccgatttcgacgtcgat
ttctgtatcgcaggtcgtgaccgcgtgattgattatgtggcacggacttacggacgtgat
gcagtgtctcaaatcgcaacattcggtacgatggcagccaaaggtgcaattcgagatgtg
gcacgtgttttgggtaaatcttatggtttagcggatcgtatttcgaaaatgatcccaacc
aaacctttgggtttaagtctgcttgaatccttagaagccgaaccacaacttaaagacatt
gtcaccaatccagccaacccagacaatgacgatgcggctgaaatttgggaaatggcgctg
aagcttgaagggattacccgaaataccggtaaacatgccggtggtgtggtgattgcccca
accaaactgaccgattattctgcagttatgtgtgacgccgatggtacggcacgtgtcgca
cagttcgataaagacgatgttgaatctgcggggctggtgaagttcgacttcttgggttta
cgtaacttgaccgtgattgaagatgccattaagcatatcaatgcacgtcctgatattact
gacccagtcgacatttcttatattccactcgacgacaaagcggcttacgatattttcgct
tcagccaacacgacggcggtcttccagtttgaatccgtgggcatgaaaaaaatgctcaag
gaagcccgtccaagtaaattcgaagaaattattgccttcgtatcgttatatcgtccgggt
ccaatggatctcattcctgactttatccatcgtatgcacggtggtgagtttgaatatcta
catcccctgcttgaaggcgtgttagagccaacctacgggattatggtctatcaggaacag
gtgatgcaggctgcgcagttctgtgcaggctatagcttgggtggtgccgatttactccgt
cgtgcgatgggtaaaaagaaagttgaggagatgattaaacatcgtcaaatcttcatcgaa
ggtgctgcgaagaaagatattgatgaagctactgccaaccatattttcgattatatggaa
aaattcgcaggttatggctttaacaaatcacatgccgcagcctacgctttggtggcttat
caaactgcttggttaaaagcacattatcctgccgaatttatggcagcggtgatgacatca
gagatgcaaaacaccgataacgtggtgtttattatcgatgactgccgccataacggttta
caagtattaccaccgtcgatcaatatgtcactgtaccaattccatgccagcgacccaaaa
accatcgtctatggtttaggtgcaattaaaggtgtgggtgaagcagcaatgcaatcggtg
attgattcacgcattcaagatggtccgttccgcgatatcttcgatttttgccatcgtgtt
gatctgaaaaaaatcaataaacgtaccttagaagcgctcattcgtgccggtgcgatggac
tgtttaggcattgaacgtgctgacttaatggctcaacttcctgaagccgtacaagctgcc
gatcaagcgcgtcagaaccgtgaaactggtattatggatttgtttggtgaagttgaagaa
gtccaacgcaaaccatcaaaacccgttaaagcttggtcagatgaagtccgtctcaaaggt
gaaaaagacactttaggcttatacctcacaggtcatccaattgatgtctatcgaactgaa
ttgaagtcttttgtcccaagtccaattaatgaacttacaccgacacgccgtggcgtgacc
actgtctttgcgggtttagttgtcgatgttgccaacttcccaaatcgtatgatggtaacg
ttagatgatggtaccgctcgaattgagatttcgaccaatcatgaacgcttccaacgtttc
aaagacattgtccaagtcgataaagttgtcgtgattgaaggtgaaatttatgagcgtgaa
ggtttcgatcgtccattaggtcgcttaaccaaggcctttagcctgaatgaaattcgccaa
aaacgtgccaatagtattaaaatcaccttaagtcctgagcatttgaccaacacacttgga
cgtgatttacagcaaattttaacgccgtataccaatattgatatgtgtacccacattcct
gtggtgttgtatttggattatccatatgcaaccacggaattgcatttgggcatcaattgg
aaagtcgcccccctcgatgaggtcctcgccaaattccgtgattactttggtaaatcatgt
attcatattgaatatcaagtgaaatctaaagctgccaaagccgtgtcttatcagcaggca
aaacccgtggatgtaccgccaccgcctgccaatatgagcatggacgaagctttggactta
tatcagtctgaatctcaagcacaatattcgtaa
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