Acinetobacter wanghuae: GFH30_10780
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Entry
GFH30_10780 CDS
T07048
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
awg
Acinetobacter wanghuae
Brite
KEGG Orthology (KO) [BR:
awg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
awg03009
]
GFH30_10780 (rlmD)
Enzymes [BR:
awg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GFH30_10780 (rlmD)
Ribosome biogenesis [BR:
awg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GFH30_10780 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
PCMT
Methyltransf_25
MTS
Ubie_methyltran
Cons_hypoth95
Methyltr_RsmB-F
TRAM
TRM5-TYW2_MTfase
Methyltransf_11
GCD14
Methyltransf_23
CMAS
Methyltransf_15
MetW
FtsJ
UPF0020
RrnaAD
PrmA
SH3_Rv0428c
Motif
Other DBs
NCBI-ProteinID:
QGA11824
LinkDB
All DBs
Position
complement(2277031..2278425)
Genome browser
AA seq
464 aa
AA seq
DB search
MKHRAHARPKQQQQPEYIFQVESLSHEGRGIAHYGSHPDHPVEKHGKKVFIRYALPGETV
RARITNVVKRLEEADSLELLSEASEMRVKPLCPHYGVCGGCSMQHIDADAQIELKQNVLK
SHLEHFAGIQPETWLTPLRSQREDYRRKARIGVRYLPHKDKLVVGFRESQSNKLTSIDRC
MILDEQFGSVTRLKQLIQSLNGQADIGHIELAMGDQEIALLVRETAELSVEDVNRLRDFT
LNKGWQLYIQAAGKENLSRIDHPEHASRLHYRLDDFDVDFGFNPLDFTQVNSTINPQMVR
LACDLLQLQAGERVLDLFCGLGNFSLPLARSVGATGQVVAVEGSEEMVQRGIENAKNNAI
AHISFHAQDLTQDFSQHAWANQGFDAILIDPPRSGAEEIMQYLPKFGAKRIVYVSCNPAT
LARDAGLLVQQGYRLTQAGVMDMFTHTAHVESIVLFEKENQIND
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatcgagcacatgcacgtccaaagcagcagcaacaacccgagtatatttttcag
gttgagtcactctcgcatgaaggacgtggcattgctcactatggttcacatcctgatcat
cctgttgaaaaacacggcaaaaaagtctttattcgttatgccttaccgggtgaaaccgtg
cgtgcgcgtattaccaatgtggtcaaacgcctagaagaagccgatagcttagaactttta
agtgaagcatctgaaatgcgtgtgaaaccgctatgcccgcattatggggtgtgcggtggt
tgtagcatgcaacacatcgatgcggatgcacaaattgaacttaaacaaaatgtattgaaa
tctcatttagagcattttgctggaattcagcctgaaacatggctaacaccactgcgttca
caacgtgaggactatcgtcgtaaagctcggatcggtgtgcgttatttgccacataaagac
aaacttgtcgttggtttccgcgagagtcaatccaataaattaacgtctattgatcgttgc
atgattttggatgagcagtttggctcagttacacgtcttaaacaattgatccaaagtcta
aatggtcaggcggacattggtcatatagaattggcgatgggtgatcaagaaatcgcatta
ttggttcgtgaaactgcggaattatcggtggaagatgtcaaccggttacgagactttacg
ttaaataagggatggcagctgtatattcaggcggctggaaaagagaatttatctcgtatt
gatcatcctgaacacgcctcacgactgcattatcgtttagacgattttgatgtcgatttt
ggttttaatccgcttgattttacccaagtaaattcaacgattaatcctcaaatggtgcgt
ttggcatgtgatttgctacagctacaagcaggggagcgtgttttagatctattttgtgga
ttaggaaacttctcattgcctttggcgcgctcagttggtgcaacaggtcaagtggttgca
gtcgaaggtagcgaagaaatggtgcaacgcggcattgaaaatgccaaaaacaatgcgatt
gcccatatttcattccacgcccaagacttaacgcaagatttttcgcaacatgcttgggca
aatcaaggttttgatgcgattttgattgatcctccgcgctctggtgcagaagaaattatg
caatatttgcccaaatttggtgcaaaaagaatcgtttatgtatcatgtaatcctgcaacg
cttgcaagagatgcagggctattggtacaacaaggttatcgtctaactcaagcgggtgtg
atggatatgtttacgcatactgcacacgtcgagtcgattgtcctgttcgaaaaagaaaat
caaataaacgattaa
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