Acetobacterium wieringae: CHL1_000971
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Entry
CHL1_000971 CDS
T08273
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
awi
Acetobacterium wieringae
Brite
KEGG Orthology (KO) [BR:
awi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
awi03400
]
CHL1_000971 (addA)
Enzymes [BR:
awi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHL1_000971 (addA)
DNA repair and recombination proteins [BR:
awi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CHL1_000971 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_16
ResIII
Plasmodium_Vir
Mei5_like
Motif
Other DBs
NCBI-ProteinID:
URN85332
LinkDB
All DBs
Position
981838..985530
Genome browser
AA seq
1230 aa
AA seq
DB search
MKWTSDQLEAIENRESNMLVSAAAGSGKTALLIQRIIRIILEEKVGVDELLILTFTRGAA
GEMKNRLSQALARELENPKNDRSFLMKQINSLGGASISTLHSFCLSVLRQYFHKGDIDPG
FAIGNDTEMALMQKEALEEVFEEEYQQAIARRDSEASEQSQEINQKQNDRDIDFLDLIEK
YSGNKNDQALKDTVETLYRFLATQPNPGSWSRQALTLFDCDQKSLKTSVWGKALKKIIKT
ELQGAMDAAIKARDLSAAAGFEKTHEQMISEEAMLNSLKKALQDDLVAGLEALKNLSYER
FKGSAKENKEHNEQIKKYRDEAKSCIAKLQKRFAINLEEMVQELNDLKKPMADLVALTEK
FWAAFQAQKARKNLVDYNDLEQLTLKILMDPDVAAEVRSRYRYIFLDEYQDTNEMQETIL
QQIVRDNNYFMVGDVKQSIYRFRLADPTIFIGKYERFGRDEDPNNRLVTLNQNFRSAQGV
INSVNAVFEKVMSAGLGEVNYDEQARLNKGLPHEGPYQKTEIHIIEEQQQETEDGDREAF
DQVEQENLTAVEVEARFVARQIQALVGTTFFDTRHNQERVIGYGDFGVLMRSVVGRGDVY
LKVFSEMGIPTYFDGGTNYYESLEITMILNLLNLMDNQHQDLPLLSIMTSPIGNFTTTEC
TRLRIAHPQGFFYQAAEAYAQTEADELAQKLAAFYQKLTKWRDQSKLMPVEDFLWKIYLE
SGYYAFVGALPGGEQRQCNLRILLKRAGDYKKSTLKGLYQFIRFVENMKKYKQDISPPAL
VGNDQAVVRLMTIHKSKGLEFPIVFLTGIGKGFNKRSNYAQVLFHKELGICPDYVNLEKR
YKHNSLAKEVCKAQSNIEMLSEEMRLLYVGMTRAEEKLVIVGTVKNCEKAWQKWYNESDE
YHLLNAASLLDWVMMGVLAGRDPALSNRELDDFSIVYHQADRFTENTEIKQNSADRSLVN
DSGRDDPKAVVDKATRYISQADREAIYQRLDFSYPAKAENELPSKMSVTEVKTYQKSDLT
DPTKRFGTITPKQEKPKFLEQKQTDFTAAQRGSALHLLMEVVDLKPIRDELLNNGQLTLS
VFLKKYLANQIEILIQKEFLPEALARTICIDNLVRFYTSALGLRLLSAETIRREIPFNFA
YPPAAIRAEWAGISEKIIVQGIIDCAFIEANQWVIIDYKTDYLKDTRQEIINGYETQINL
YAQALAELTGIPVGEKIIALITMNEALSIP
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggaccagtgatcagttagaagcaatcgaaaaccgggaaagcaacatgttggtt
tctgctgccgccggatcaggtaaaacagcactgctgatccagcggattatacgcattatt
ctggaagaaaaggttggtgttgatgagctgctcattctgacctttacccggggggctgct
ggcgaaatgaaaaatcgtctgagtcaggctttggcccgggaactggaaaaccccaaaaat
gaccgcagctttttaatgaagcaaataaatagtttagggggggcttccatttccaccctg
cattctttttgtcttagcgttttacgccaatattttcataagggtgacattgacccgggt
tttgccattggcaatgatacggaaatggcattgatgcaaaaagaggctctggaagaggtc
tttgaagaagaataccagcaagccatcgcccggagagattcagaagcgtccgagcagagc
caggaaataaatcagaaacaaaatgatcgggatatcgattttttggatctgatcgaaaaa
tacagtggcaataaaaatgatcaggcattaaaagacacagtggaaaccctctaccgtttt
ctggccacccagccaaatcccgggagctggagtcgtcaggccttgacattgtttgattgc
gatcagaaaagcctgaaaacatcggtgtggggtaaggccttgaaaaaaataattaaaacc
gagcttcagggggccatggatgccgccattaaagccagagacctcagcgctgctgccggt
tttgagaaaacccatgagcagatgataagtgaagaggcgatgctaaattccctaaaaaaa
gcgctacaagacgatctggttgcggggctggaagcgttaaaaaatcttagctatgaacgc
tttaaagggtcggccaaagagaataaggaacataatgagcaaatcaaaaaatatcgggat
gaagccaagagctgtatcgcaaaactgcagaaacgttttgccatcaatctggaggagatg
gttcaggagcttaatgatctgaaaaaaccgatggccgatctggtggcactgaccgaaaaa
ttttgggcggcctttcaggcccagaaagcccggaaaaacctcgtcgattacaatgacctg
gagcagctgacccttaagattctgatggatccggatgtggcggcagaggttcgctcccgc
tatcgctatatttttctggatgaatatcaggacaccaatgaaatgcaggaaaccatcctc
cagcaaattgttcgggataataattattttatggtcggggatgttaaacaaagcatctac
cgctttcgtttggctgatccaactatttttatcggcaagtatgaacgttttggtcgggat
gaagaccccaataatcgtctggtgacccttaatcagaatttccgatcagcccagggggtg
atcaacagcgtcaatgctgtttttgagaaagtcatgagtgccggactgggggaagtcaat
tatgatgaacaggctcggcttaacaagggtctgccccatgaagggccctatcaaaaaacc
gagatccatatcattgaagagcagcagcaggaaaccgaggatggtgatcgtgaggctttt
gatcaagtggaacaggaaaatctgacggctgtcgaagtggaggcccgttttgtggccagg
caaattcaagcgttggttggcacaaccttttttgatactcgccataatcaggaacgtgtc
atcggttatggtgattttggagtgctgatgcgcagtgttgtcggaagaggagatgtctat
ctcaaagttttcagcgaaatggggattcccacctatttcgacggcggtaccaattattac
gagtcgctggaaatcacgatgattctaaacttgctgaacctgatggacaatcagcatcag
gatttgccgctactgagtattatgacctcaccgatcggcaattttaccaccaccgaatgt
acccggctgcggattgcccatcctcagggatttttttatcaggctgcggaagcctatgct
cagactgaagctgacgagctggcgcaaaaactggctgccttttatcaaaaactgacaaaa
tggcgcgatcaatccaagctgatgccagtggaagattttctctggaaaatttatctggaa
tccggttattatgcttttgtcggggccttgcccggtggtgaacagcggcagtgcaattta
cggattttgttgaagcgggctggcgattataaaaaatcgaccctcaagggtttgtatcaa
ttcatccgctttgttgaaaatatgaagaaatacaaacaggatatttcgccgccagccctg
gttggtaatgatcaggcggtggttcggctgatgacgattcataaaagtaaggggcttgaa
tttccgattgtttttcttaccggaatcggaaaaggctttaataagcgcagtaattatgcc
caggtgttattccataaagagctggggatctgcccggactatgtcaatttggaaaaacgc
tacaaacataattcgctggccaaggaggtctgcaaggcccaaagtaacatcgaaatgctt
tctgaagaaatgcggctgctgtatgtggggatgacgcgagctgaagaaaagctggtgatc
gttggaacagtgaagaactgtgaaaaagcctggcaaaaatggtacaacgagtcggacgaa
taccaccttctcaatgccgccagtttgctggattgggtgatgatgggcgtattggcgggc
cgggatccggcgctgtccaatcgggagctggatgattttagcattgtatatcatcaggct
gatcggtttaccgaaaacacggaaatcaagcagaattcagctgatcggtcactagtgaat
gattcggggagggatgatccgaaagcagtagtagataaggcaacacgttacatttcacag
gccgaccgggaggctatttaccagcgcctggattttagctatccggccaaagcggagaac
gaactacccagtaagatgagtgtgaccgaagttaaaacgtatcagaaaagcgatttgaca
gatccgactaaacgatttggaacgattactccaaaacaggagaaaccaaaatttctggaa
caaaaacagacggatttcaccgctgcgcaacggggatcggccctccatctgttgatggaa
gtggtcgatttaaaaccgattcgggatgaattgctaaataatggccagctgaccctgtcg
gtctttctaaaaaaatatctggcaaaccagattgaaatcctgattcaaaaagaatttctg
ccagaagctttggcccgaaccatctgcattgataacctggttcggttttatacctcagct
ctggggctccggttattgtcagctgaaacaatcaggcgggaaataccgtttaactttgct
tacccaccggcagcaatacgagcagagtgggcgggaatttctgaaaagatcattgttcag
ggaattattgactgtgcctttattgaagccaatcaatgggtgatcatcgattataaaaca
gattatttaaaagatacccgccaggagatcattaatggctatgaaacgcagatcaatctg
tatgcccaagccctggcagaattaaccggaattccggtgggggaaaaaataatcgcgttg
attaccatgaacgaagcgctcagcattccctga
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