Acetobacterium wieringae: CHL1_001076
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Entry
CHL1_001076 CDS
T08273
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
awi
Acetobacterium wieringae
Pathway
awi02020
Two-component system
awi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
awi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CHL1_001076 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CHL1_001076 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
awi03021
]
CHL1_001076 (rpoN)
Transcription machinery [BR:
awi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CHL1_001076 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_11
HTH_IclR
HTH_36
Motif
Other DBs
NCBI-ProteinID:
URN85435
LinkDB
All DBs
Position
1089070..1090521
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AA seq
483 aa
AA seq
DB search
MNIKFDLNITQTQKLIMTQEMRQSIEILQLTAMELNGLIETEIMENPVLEFNEVSIKEVV
PINEDGGPLKGDLVKEEPNPEPPPKEEIQWDEYFHSMENADYRGQLQPIADNDDEYGFEK
FTSQEKTLNEYLHFQFTMQEKDFSEEEKRIGEYLIDCIDDNGYLLIDLDYVKNILEVAEE
PISKMIAVIQGFDPSGVGCRDIKECLLIQLRQMGYDDDEVFMDIVKNHLIDLADNQFKRI
AQETGLTIEDVYEFKEVIKTLEPKPGREFSCSERVSYVIPDGSIEIVNDELVVKVNDVSA
PRLRINNYYKGLLKNSDKNDETKLYLEKKLDSAAFLIKSIEQRRDTIKKVITAIAESQRG
FFFEGVGDLRPLTLKTIAETIEVHESTVSRAIRGKYIQTPKGTYALKFFFKRGYSQGEED
RSSDAIKRLIQELIDQEDKKKPLSDQRISELLQAKNLDVARRTVAKYREALLIPPSSKRK
EYR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaaatttgatttaaatattacccaaacccaaaaactgattatgacccaggag
atgcgtcagtccatcgagattttgcagctgacagctatggaactcaatggtttgatcgaa
accgaaatcatggagaacccggtattggaatttaatgaagtgtccattaaagaagtggta
ccaattaacgaggatggcggaccactaaaaggcgatttggttaaagaagaaccaaatcca
gagccgccgcccaaggaggaaatccagtgggatgagtattttcatagtatggaaaatgct
gattaccggggtcagcttcagccgattgctgacaatgatgatgaatacggttttgaaaaa
tttacgtcccaggaaaaaacccttaacgaatatctgcattttcaatttaccatgcaggaa
aaggactttagtgaagaagaaaaacggatcggtgagtatttgattgactgcatcgatgat
aacggttacctgctcatcgacctggactatgtaaaaaacattctggaagttgctgaagag
ccaatctcaaaaatgattgccgttattcaaggatttgatcccagtggggtgggatgtcgg
gacataaaagagtgtttgctgattcaattgcgtcaaatggggtatgatgatgatgaagtg
ttcatggacattgtcaaaaaccatttaattgatctggctgataaccaatttaagcggatt
gctcaggagactggcttaacaattgaggatgtctatgaattcaaagaagtgatcaaaacc
ctggaaccaaagcccggccgggagttctcctgttcggagcgggtctcgtacgtcattccc
gatgggagcatcgaaattgtcaatgatgagttggtggtgaaggtcaatgatgtgtcggcg
ccccgattgcgaatcaataattattataaaggactccttaaaaattcggataaaaatgat
gaaaccaagctttatctggaaaaaaagctcgatagtgcggcttttttaattaaaagcatt
gaacagcggcgggatacgataaaaaaagtgattaccgccatcgccgaatcccagcgggga
tttttctttgaaggggtgggtgatttaaggccactgacccttaagacaatcgctgaaacc
attgaagttcatgagtcgacagtcagtcgggcaattcgcggaaagtatattcaaacaccg
aaaggcacctatgcgcttaagtttttctttaaacggggatactcacagggcgaggaagac
cgatcctccgatgcaatcaaacgattgattcaagagctgattgatcaggaagataagaaa
aaacccctgagtgatcagcgaatatcagaattactacaggctaaaaatctggatgtggcc
aggcgaaccgttgccaaatatcgggaagcacttttgatcccgccgtcctccaaacgaaaa
gaataccggtag
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