Acetobacterium wieringae: CHL1_001101
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Entry
CHL1_001101 CDS
T08273
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
awi
Acetobacterium wieringae
Pathway
awi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
awi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CHL1_001101 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
awi03021
]
CHL1_001101 (rpoD)
Transcription machinery [BR:
awi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CHL1_001101 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
URN86158
LinkDB
All DBs
Position
1122706..1123770
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AA seq
354 aa
AA seq
DB search
MPEVQQLLKRGKSKGNLNNHDFEEILDKADLDPEEIDSIYLYLQKEGIEIAFTDLELEAL
EAAELEEENQKELELADSVSVNDPVRLYLKEIGKVPLLTGDEEMELARRMEAGDEMAKKE
LAEANLRLVVSIAKRYVGRGMSFLDLIQEGNLGLIKAVEKFDYTKGFKFSTYATWWIRQA
ITRAIADQARTIRIPVHMVETINKLIRVSRQLLQEYGREPTPAEIGKEMGFSEEKVREIQ
KIAQDPVSLETPIGEEEDSHLGDFIPDEEAPAPAEAASYALLKEQLIEVLNTLTEREEKV
LRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDYLT
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggtgcagcagctgttaaagcgggggaaatcaaaaggaaatttaaataaccac
gattttgaagaaattttggataaggcggatcttgaccctgaagaaattgattcaatctat
ttgtatctgcaaaaagaagggatcgaaatcgcttttaccgatctcgaactggaagccctg
gaagcggcggaacttgaggaagagaaccagaaagaacttgaactggcagattcagtcagt
gtcaatgatccggttcgtttatacttaaaagaaatcgggaaggtacccttactgaccggc
gatgaagaaatggaattggctcgccgcatggaagcaggcgatgagatggccaagaaagaa
ttggctgaagccaacctgcgactggtcgtcagtatcgccaagcgttatgtgggccggggt
atgtcgtttctcgatctgattcaggaaggaaacctcggcttgatcaaggcggttgagaaa
tttgattataccaagggttttaaattcagtacctatgctacctggtggattcgccaggcg
attacccgggccattgccgatcaggccagaacgatccgaatcccggtacacatggtcgag
accatcaataaattgatccgggtttcccggcaattgctgcaggaatacgggcgggaacca
acccccgcagaaatcggcaaggaaatgggtttttctgaagaaaaagttcgggaaattcag
aaaattgctcaggatccggtttctttggaaaccccgattggggaagaagaagacagccat
ttgggtgattttattcccgatgaagaggccccggcaccagctgaagcggcatcctatgca
ctgctgaaagaacagctgattgaagtgttaaataccctgaccgaacgtgaagaaaaggtg
ctgcgattacgttttggtctcgatgatggtcgggctcgaacacttgaagaagtcggcaaa
gagtttaacgtcacccgggaacggatccgacagattgaagccaaggcgctgcgtaaactc
agacaccccagccgcagcaagaaattgaaggattacttaacctaa
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