Acetobacterium wieringae: CHL1_001941
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Entry
CHL1_001941 CDS
T08273
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
awi
Acetobacterium wieringae
Pathway
awi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHL1_001941 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awi03019
]
CHL1_001941 (recQ)
03400 DNA repair and recombination proteins [BR:
awi03400
]
CHL1_001941 (recQ)
Enzymes [BR:
awi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHL1_001941 (recQ)
Messenger RNA biogenesis [BR:
awi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CHL1_001941 (recQ)
DNA repair and recombination proteins [BR:
awi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CHL1_001941 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
URN82845
LinkDB
All DBs
Position
complement(1987214..1989400)
Genome browser
AA seq
728 aa
AA seq
DB search
MTLKKNLSQYFGYDTFKEGQEKIITAVVSGQDVLGIMPTGGGKSLCYQLPAIELPGITLV
ISPLISLMKDQVDALGEMGIPATFLNSSLDEASYQKRLTEIRANRYKLLYIAPERLCVPA
FVELMRALSVSLVAVDEAHCISQWGHDFRPHYREIPGFIGSLTPRPVVAAYTATATIPVI
KEIKALLALRDPVESIIGFDRPNLLYQVVKTGDKLGYITDTITRIFPGQAGIIYCATRKT
VESVTARLIGLGFSAGAYHGGMSPEERERNQQDFINDQLPIMVATNAFGMGINKPDVRFI
IHYNMPQNMEAYYQEAGRGGRDGEPSHCTILYSPADIVKQKQLIGLNQTSPERQTLLFEN
LQYLVDYCHTNDCLRKSILHYFGEAADYERCGNCGNCLDQSEMVDITRDAQKILSCVYRM
KNRFGLNMVIAVLRGSKNKKVLELGFDQLSTYGLMGEQSAESLREMIMTLVAKGYLVVTA
DEYPVLKLTPAAGRVLKGHETVFHKKHLLNLTVAKTRSAGKAIAPVDCDAALFEQLRTLR
REIAKDKALPPYVIFPDAALKEMAAYFPRTEAEFLNITGVGQARYDHYGSVFIEAISRFA
DNNPITLRPRPEPVAPELRVARPQAGEKEPKTASWEISYELFAGGLTIAEIARQRELTEN
TVLAHLIRCDQEGRTIDWSDFVDPEKELEIINAIGTVGLEALRPIKEALPEHYSYAEIKI
VIHKNGLQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcttaaaaaaaacctgagccagtattttggctacgatacatttaaagaggggcag
gaaaaaatcataacggcagtggttagtggccaggatgtgctggggattatgcccaccggc
gggggaaaatcgttgtgttatcagcttccggccatcgagttgcccggcatcaccctggtg
atctcaccgctgatttcactgatgaaggatcaggtcgatgccctgggggaaatgggcatc
ccggccacctttttaaacagcagtctcgatgaggccagttatcaaaaacggttgacggag
atccgggcaaatcgctacaagctcctctatattgctccggaacggctttgtgttccagcc
tttgtagagttgatgagagcgctttcggtatctctggtggcggtggatgaagcccattgt
atcagtcaatggggtcatgatttccggccccattaccgggagatccccggttttatcggg
agtcttacaccccggccggtggtggctgcctataccgccaccgccacgatcccggttata
aaggaaatcaaagcgctgctggcactacgtgatccggtggaatcaattatcggctttgat
cggcccaacctgctttatcaggtggttaagaccggggataagcttggttatattaccgac
accatcacccggatctttcccggtcaggcggggattatctattgtgccacccgcaaaacc
gttgaaagcgtcacggccaggctgattggtctggggttttctgctggcgcttatcacggt
ggcatgagtcccgaggaacgggagcgtaatcagcaggatttcatcaatgaccagctgccg
atcatggtagccaccaatgcttttgggatggggatcaacaaaccggatgtgcgctttatc
atccattacaatatgccccagaatatggaggcctattatcaggaggccggtcgcgggggc
cgggatggcgagcccagtcactgcaccattctttattcgccagcggatattgttaagcag
aagcagctgattgggcttaatcagacttccccggagcggcaaacgttgctgtttgagaat
ctccagtatctggtcgattattgtcacaccaatgactgcctcagaaaaagcatcctccac
tattttggggaagcggccgattatgagcgctgcggcaattgcggcaactgtctggatcag
tcggaaatggtggacatcacccgggatgcccagaagatcctgtcctgtgtttatcggatg
aaaaatcgttttggtctgaatatggtgattgcggtgctgcggggctccaaaaacaaaaag
gtattggagctgggctttgatcagctgtccacctatggcctgatgggcgaacagagcgcc
gaaagcctccgggaaatgattatgaccctggtggccaagggctatcttgtcgtcactgcc
gacgagtacccagtactgaaattgaccccagcggcggggcgggtcctgaaaggccacgag
accgtctttcataaaaaacacctgcttaatcttacggtcgccaaaactcgtagcgcaggc
aaggccatcgccccggtggattgtgatgccgctctgtttgaacagttgcgaacgctgcgc
cgggagatcgcaaaggacaaagccctgccaccctatgtgatctttcccgatgcggcttta
aaagagatggccgcctattttccccgcaccgaagccgaatttctaaacatcaccggcgtc
ggtcaggcccgctatgatcattatggttcggtctttatcgaagcgattagccgttttgct
gataacaatccgattaccctccggccccggccggagccagtcgcgccggaactccgggtg
gcccggccgcaagcgggagaaaaggagccgaagaccgcttcctgggaaatcagctacgaa
ctgtttgccggggggctgacgattgccgaaatcgccaggcagcgggagctgacggaaaac
accgtcctggctcacctgatccgctgtgatcaggaaggtcggaccattgactggtcggat
tttgtcgatcccgagaaagagctggaaatcatcaacgccatcggcactgttggcctggaa
gccttgcgaccgatcaaagaagccctgccggagcactattcctatgccgagattaaaatt
gtgatccataaaaatggcttacagtag
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