Acetobacterium wieringae: CHL1_002158
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Entry
CHL1_002158 CDS
T08273
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
awi
Acetobacterium wieringae
Pathway
awi03410
Base excision repair
awi03430
Mismatch repair
awi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
awi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHL1_002158 (recJ)
03430 Mismatch repair
CHL1_002158 (recJ)
03440 Homologous recombination
CHL1_002158 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
awi03400
]
CHL1_002158 (recJ)
DNA repair and recombination proteins [BR:
awi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CHL1_002158 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CHL1_002158 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CHL1_002158 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
URN83044
LinkDB
All DBs
Position
complement(2218793..2220754)
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AA seq
653 aa
AA seq
DB search
MTSIEETRRYLNPSLADLHDPFLFNAMEKVVNRIAKAKAANEKVCLYGDYDADGTIGVSI
LYSFLKSHKFNVSYFIPNRLITGYGLHIDPLQNLIDEAVGLLITVDNGISANDQIDFCNQ
YNLDVIITDHHECQGTLPAAFGIINPKVPGENYPFKELCGAGVAFKLVQAISTRLGLDFD
LQNAIECVALATVADLVPLQNENRILVAMGLHYLNSNHKNPGIRALIEVSELAQVKAWHF
GFVLGPKINAAGRLGEAHHIVDLLTGHDPARLMELAKFLSDENRKRQNLESTILDAALAQ
VESQELYKNDIIIVIGENWHSGVIGIVASRIQEKYYNPVIVVSIADRKGKASCRSVEGFN
IFEALHSCSELFTSYGGHDQAAGFSIDAENLAQMTKKIIEYGHLTEIKKHLIKKIPYDAI
IDETEITWNLFNDCSHFEPCGLGNPGVQFVLNRPDIISMRTMGKENNHLRLSLSNDVSGV
GFGFGEFLTNRPELSANGFRGVEFICRLDVNEYRGNKTLQLVLKDIRQNPIWDFDMAMFL
VKFIVQSVNPKIEIKLQSYGIDPYEMRMQRETVKCVYLVLKKSGEVGVSVQNPNSTKLSP
FHFLMACEILREAGLIVYRLKNGLVFSKIIETQEKKDIQNTQLMIKLEKMICD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattgaggaaacccggcgttatcttaatccttcgctggctgatcttcatgat
ccgtttctgtttaacgcgatggagaaagtagtaaatcgaattgcaaaagcaaaagcggca
aacgaaaaagtatgtttgtatggcgattatgatgcagatggcacgattggagtatcgatc
ctttacagttttttaaaaagtcataaattcaatgtttcctactttattcccaatcgactg
atcaccggttatggacttcatattgatccgctgcaaaacttaattgatgaagcggtgggg
cttctgattactgtcgataatgggatttccgccaatgaccagattgatttttgtaatcag
tacaatctggatgtaattataaccgatcaccatgaatgtcaaggaacgcttccggcagca
tttggaattatcaaccctaaggtgccaggagaaaattatccatttaaggaactatgtggt
gctggggtggcttttaaacttgttcaggcgatcagtacgaggctcggattagatttcgat
ttgcagaatgcgattgaatgcgttgcattagccacagtagcagacctggttccacttcag
aatgagaatcgaattctggttgccatgggactacattaccttaattcgaatcacaaaaat
cctggaattcgggcattgattgaagtaagtgagttggcccaggtgaaagcctggcatttt
ggttttgtgctgggtcccaagattaatgcagcagggcgattaggagaggcacatcacatt
gttgacttactcactggacatgatccagctagattgatggaattggctaaatttttaagt
gatgaaaaccggaaacgccagaatcttgaatcaaccattctggatgcagcacttgctcag
gttgaatcccaggagctatataaaaatgatattataatcgtcattggagaaaactggcac
tcgggtgttattgggattgttgccagtcggattcaggaaaagtattataatcctgtgatt
gtcgttagtatcgctgatagaaaggggaaagcttcctgtcgcagtgtggaaggatttaat
attttcgaagccttacactcttgcagtgagttatttaccagttatggtggccacgatcaa
gcagccggttttagtatcgatgctgagaatctcgcccagatgaccaagaaaattattgaa
tacggacaccttacagaaataaaaaaacatctgatcaaaaaaattccctacgatgcgatt
attgatgagacggaaatcacctggaatctttttaatgactgctcacattttgaaccgtgt
ggtctgggaaatcccggcgtgcaatttgtcctcaaccgtccagatattatttcgatgaga
accatgggaaaagaaaataatcatttgcggctgagtttgagtaatgatgttagcggagtc
ggttttgggtttggcgagtttttgaccaatcgccccgaattaagcgcaaatggtttccgg
ggagtggagtttatttgtcgcctggatgtcaacgagtatcgagggaataaaactttgcaa
ttggtattaaaagacatccgccaaaatcccatctgggattttgacatggcgatgtttttg
gtgaagttcatcgttcaatcggtgaatcccaaaatagaaattaagttgcagtcttatgga
attgatccgtatgaaatgcgaatgcagcgggagaccgtaaaatgcgtttatctggtcctg
aaaaaatcgggagaagttggggtatctgtacaaaacccaaatagcacaaaattgtcgcca
tttcattttttaatggcatgcgaaatacttcgagaagcaggattaattgtataccgatta
aaaaacgggctggttttttcgaaaattatagaaacacaggaaaaaaaggatattcaaaac
acgcaactaatgataaaattagaaaaaatgatttgtgattga
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