Entry |
|
Name |
(GenBank) ATP-dependent DNA helicase
|
KO |
|
Organism |
awi Acetobacterium wieringae
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:awi00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHL1_002369
09124 Replication and repair
03420 Nucleotide excision repair
CHL1_002369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:awi03021]
CHL1_002369
03036 Chromosome and associated proteins [BR:awi03036]
CHL1_002369
03400 DNA repair and recombination proteins [BR:awi03400]
CHL1_002369
Enzymes [BR:awi01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CHL1_002369
Transcription machinery [BR:awi03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CHL1_002369
Chromosome and associated proteins [BR:awi03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CHL1_002369
DNA repair and recombination proteins [BR:awi03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CHL1_002369
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2439391..2441763
|
AA seq |
790 aa
MNNQPEIKLSVRNLVEFILRSGNIDSQFISNASALEGTRAHQRVQKDNRDKGYAPEVSLK
HRFEYEGFCFRIDGRADGIITSESEIIVDEIKSTSRPLEQIDEDYSQTHWAQAKCYAYIY
AIQNELPVISVQLTYFQLDTDEIKKYLKIFTQTELTVFFYDLINQYLVWAALTSNWVTRR
NTAIRALAFPFERYRPGQRELAVAVYKTIVEQKKLFVQAPTGIGKTMSTLFPAIKSMAEG
HTAKIFYLTAKTIVREVAEEAFAKMANQGLAFKSVTLTAKDKICFQEETICDPDHCSYAR
GHFDRVNAALLDILKQEDRLTRPVIENYAHKHQVCPFEFSLDLTLFSDCVICDYNYVFDP
RVYLKRFFSDNGSDYSFLIDEAHNLVDRARSMFSAELYKKPLLELKRLFKDNDPSLAKAL
GKLNTHMIGLRKLATTNSPHRQKEAPKDFLLLVMKLISLAEVWLVSNEGRPGHEKLLELY
FNALTFMRTAEFYDDHFLTYVENANGDTRIKLFCLDPSHLLGEALKRGRAAIFFSATLSP
LDYFSEILGGDPDSYKISLPSPFDVKNRELLIADTISTTFRNREKTYSTIVRCIKTVRDQ
QPGNYIVYFPSYKYMNAVFEIFSASYPEVVTIRQAPEMNEEDRELFLGQFRPAPGAAPTG
MLGFAVLGGIFSEGVDLKHEGLIGAIIVGVGLPQICFERDIIRDYFNKKNHTGYQYSYLY
PGMNKVLQAAGRVIRTETDRGVIVLIDQRFSSPSYRQLFPQEWFPHRQIRNEPELKKALQ
DFWAMTIPQN |
NT seq |
2373 nt +upstreamnt +downstreamnt
atgaacaatcaacccgaaataaaactatccgtccgcaatctggtggagtttatcctccgc
tccggaaatatcgattctcagtttatcagcaacgccagtgcactggaaggaacccgggcc
caccagagggttcagaaagataatcgagacaaaggctatgcccctgaagtatcgctaaaa
catcgtttcgaatatgaaggcttctgtttccgaatcgatggccgggccgatggcatcatc
accagcgagtccgagattattgtagacgaaatcaagtcaaccagccggccgttggaacag
attgacgaagactacagccaaacccattgggcccaggctaaatgctatgcctatatttac
gccatccagaatgaactaccagtaatcagcgtacagctgacctattttcagctggatacc
gatgaaatcaaaaagtatctaaaaatctttacccaaactgaactgactgttttcttttac
gatttaatcaatcagtacctggtctgggctgctctgaccagcaactgggtgactcgccgc
aataccgctattcgggctcttgcttttccctttgagcgttatcgcccgggccagcgggaa
ctggcagtagcggtttataaaaccattgtcgaacagaaaaaactttttgtccaggctccc
accggaattggcaaaacaatgtcaactctgtttcccgccatcaaatcgatggctgaaggg
catactgccaaaattttttatctaaccgccaaaaccattgtccgggaggttgccgaggaa
gcctttgctaaaatggcaaatcagggattggctttcaaaagtgtcactctgactgccaag
gacaaaatctgttttcaggaagaaaccatctgtgatcccgatcactgctcttatgcccgg
ggtcattttgaccgtgttaatgccgcactgctggatatccttaagcaggaagaccgcctg
acccgacccgtcattgaaaactatgcacacaaacatcaggtctgcccttttgagttttct
ctcgatttaaccctctttagtgactgcgtgatctgtgattacaactatgtttttgatccc
cgggtttatctcaaacgttttttttccgataacggcagcgactacagctttttgattgac
gaagcccataatctggtcgatcgggcccgctcaatgttttcggccgaactttataaaaaa
ccattgctggagctaaagcgattgtttaaagataacgaccccagtcttgccaaagctctg
ggaaaactcaacactcacatgatcgggctgcgaaaattggctacaaccaactcacctcac
cgccaaaaagaggcccccaaagatttcttgctgctggtgatgaagttgatttctctggcc
gaagtatggctagtcagcaatgaaggccgcccgggtcacgagaaactactggaactgtat
tttaacgccctgacctttatgcgcaccgccgagttttacgatgaccactttctaacctac
gtcgaaaacgccaacggcgatacccgtatcaaacttttttgtctggatccttcccacttg
ctgggagaagccctcaaacgaggccgggcggcgatcttcttttcggccaccctgtcacca
ctcgactatttttcagaaattctcggtggtgaccccgacagctataaaattagtctgcca
tcgcccttcgatgttaaaaaccgagaactactgattgccgataccatctcaaccaccttc
cgcaatcgcgaaaaaacctactccaccattgtccgttgcatcaaaacggtacgggatcag
cagccaggcaactacatcgtctattttccatcttataaatatatgaatgcggtgtttgaa
atttttagcgccagctacccggaggtcgtcaccatccggcaggctccggaaatgaacgag
gaagaccgggagctgttcctgggtcagttccgaccggcacccggggctgccccgaccggg
atgttgggctttgcggtgctgggcgggatcttttccgaaggcgtggacttaaagcacgag
ggcctgatcggcgccattattgtcggagtcggtctgccccagatctgttttgaacgtgat
atcatccgggattatttcaataaaaaaaaccacaccggctatcaatattcctacctctat
cctggcatgaacaaggttctccaggctgccggacgggtgattcgaaccgaaaccgaccga
ggcgtgatcgttctgattgatcagcgcttcagtagccctagctatcgtcagttatttcca
caggagtggtttccccatcgccagatccggaatgagcccgagcttaaaaaagccctccag
gatttctgggccatgactataccgcaaaactga |