Acetobacterium wieringae: CHL1_003092
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Entry
CHL1_003092 CDS
T08273
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
awi
Acetobacterium wieringae
Pathway
awi03420
Nucleotide excision repair
awi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
awi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CHL1_003092
03430 Mismatch repair
CHL1_003092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
awi03400
]
CHL1_003092
Enzymes [BR:
awi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHL1_003092
DNA repair and recombination proteins [BR:
awi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHL1_003092
MMR (mismatch excision repair)
Other MMR factors
CHL1_003092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PhoH
Hormone_3
Motif
Other DBs
NCBI-ProteinID:
URN83929
LinkDB
All DBs
Position
complement(3164821..3166974)
Genome browser
AA seq
717 aa
AA seq
DB search
MKNFETFKQSYQIKLNLQQEQAVVRTRGQRLLLAVPGSGKTTVIICRIAYLLEVLQIDPG
EILTLTFSRMGARDLKARYTKLFGESQAKTLHFSTIHSFALGVIRHYERSYRRRAHTVLG
NITPVIRELYRQLFQEHPGEVELGEICQRIGFCKNMMLTEAEIKLLPPLEVDFLAIYEAY
ESYKRQEQLMDFDDILKYAWGLLKKYPEMLAFFQNKYTYIHLDEAQDTSKIQFKIIELLT
GKNGNLFMVGDEDQSIYGFRGAFPEALLTFKETWPQGEVLLMETNYRSTRQIVDKANAFI
KLNHERYQKEMVVPGDRSFTGVPIAREWVTSSEAQYQLIIEAIRREGKEIAVLYRNNESA
IPLVDLFDVAGITYQIKEHSPQFFGHFLIKDIRLFYEFAINPDDINLFTQVYYKMDTAIS
RETINQLERRHKPGENVLDTLIKISGDRAWQVKRLKELKDGFEKLQTVPPQRGIVMILDS
LGYRSYLNFRISSGQSEESIEQKLTVLKILGGRVNNFPDFFAKLEMLSEKLQEPQTRKAK
TPRVTLSTLHSSKGLEFEKVFIIDATEGQIPNVSNTPEDAKAYAEEVRLFYVGATRAKQE
LIFLCVKHRDKDIKPSPFISYLIDGLPRKKSPTEKPGLRHRESFGRQQGKWQDYHTGAAS
GATVDLQAYQQGRVVIHQRFGAGTILTRNGNIASIHFESAGEKKMNLAVCLENGVIK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattttgaaacctttaaacagtcctatcaaataaaactaaatctccagcaggaa
caggcggtggtgcgaacccgaggtcagagactcttgctggcggtgccgggcagtggtaaa
acgacagtgattatctgccggatcgcctatttgctggaggttttacaaatcgatccgggg
gaaattctgaccctgactttcagccggatgggggcccgggatttaaaagctagatatacc
aaactgtttggcgaatcccaggcaaaaaccctccatttcagcaccatccacagctttgct
ttgggggttatccgtcattatgagcggagctaccggcgccgggcccatacggtactgggg
aatatcacgccggtgatccgggagttataccggcagctttttcaggagcatccgggggaa
gttgaactgggcgaaatttgtcaacggatcggattttgtaaaaacatgatgctgaccgag
gcagaaataaaactgctgccaccactggaggttgattttctggcaatctatgaagcctat
gaaagctataaacgccaggaacaactgatggattttgatgacatattaaaatatgcctgg
ggactattaaaaaagtaccccgaaatgctggccttttttcagaataagtatacctatatc
catttggacgaagcccaggatacgtcaaagattcagtttaaaatcattgaactattaacc
gggaaaaacgggaatctttttatggtgggggatgaggatcagagtatttatggttttcgg
ggcgcttttcctgaggctttactgacctttaaagagacctggccccagggcgaggtcttg
ctgatggaaaccaattaccgcagcacccggcagatagttgacaaggccaatgcctttatc
aagctaaaccatgagcgctaccaaaaagaaatggtggtgcctggggacaggtcgtttact
ggggtgccaattgcccgggaatgggtgacgtccagcgaagctcagtatcagctgatcatt
gaagcaatccgccgggaaggcaaggaaatcgcggtgctctatcgcaacaatgagtcggct
attcccctggtggatctcttcgatgtggctggaatcacttatcagatcaaggaacatagt
ccacagtttttcggtcattttctaattaaggatatccggcttttttatgagtttgcaatt
aatccggatgatatcaatttattcacccaggtttactataagatggatacggccatctcc
cgggaaaccatcaaccagctggagcggcgacataaacctggcgaaaatgtccttgacacc
ctgatcaagattagtggcgaccgggcctggcaggttaaacggctcaaagagcttaaggac
gggtttgaaaaactacagacggtgccgccgcagcggggaattgtgatgattctggatagc
ctggggtaccgctcttatctcaatttcaggatcagttccgggcaatcagaagaaagtata
gagcagaagctgacggtgcttaaaattctcgggggtcgggttaacaattttccggacttt
tttgctaagttggaaatgctgtctgaaaagctgcaggagcctcaaaccagaaaagcgaaa
acaccccgagtgaccctgtcgaccctccattccagcaaagggctggaatttgaaaaggtc
tttatcattgatgccaccgaagggcagattcccaatgtctccaataccccggaagatgcc
aaggcctacgccgaagaagtccggctcttttatgtcggcgccacccgggccaaacaggag
ctgatatttctctgtgtcaaacaccgggacaaggacatcaaaccatcgccatttatttct
tatttaattgatggcctgccccgaaaaaaatcgccaaccgaaaaaccggggcttcggcat
cgtgagagttttggccgtcagcagggtaaatggcaagattatcataccggtgcggccagc
ggcgccaccgtcgatctacaggcttatcagcagggtcgggtagtgatccatcagcgtttt
ggggccggtaccattctgacccgtaacggcaatattgccagtatccattttgagagcgcc
ggggaaaagaaaatgaatctggctgtctgcctggaaaacggtgtgattaaatga
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