Arcanobacterium wilhelmae: P8A24_03650
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Entry
P8A24_03650 CDS
T08983
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
awl
Arcanobacterium wilhelmae
Pathway
awl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8A24_03650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awl03019
]
P8A24_03650
03009 Ribosome biogenesis [BR:
awl03009
]
P8A24_03650
Enzymes [BR:
awl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
P8A24_03650
Messenger RNA biogenesis [BR:
awl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
P8A24_03650
Ribosome biogenesis [BR:
awl03009
]
Prokaryotic type
rRNA processing factors
P8A24_03650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
WFN91134
LinkDB
All DBs
Position
828406..831015
Genome browser
AA seq
869 aa
AA seq
DB search
MADEANEKVTSSEAAEKNTTKRAARQRKAPAKHEGAAESVAQSLAELAQEKGKSVFSAAE
EAETTPDVVAPAPMTALLFQEPDVEKAVRTRRTRKKVSEPDVDAPEASEEFAEEDAPKRR
RRGTRGGRRSAEVEAPNSSDEESAEDSTDETSKKKRTRRKKSDAADAVAEKSDAKTESGE
SSEPSEGEEISVRRRRRRRSDADEVTAPKGSTRLEAKRQRRKEGRAAGRRRQTISEAEYL
ARRESVEREMLVRERDGLNQIAVIEDGVLVEHFVARHTQTSMVGNVYLGRVQNVLPSMEA
AFVDIGKGRNAVLYAGEVNWEAAGLEGKPRKIEQALKSGDTVLVQVTKDPIGHKGARLTS
QVTLAGRHLVLVPSGAMTGISRKLPERERARLKKILKEIVPGDHGVIVRTAAEGATEEQL
RDDVERLTKAWKDIEAKAKSTKNAPSLLKGEPELAVRVVRDIFNEDFRALKVQGRNAWET
ISEYVRDLSPELMDRVEHWESDADIFAANRVDEQLQKAFDRKVILPSGGSLVIDRTEAMT
VIDVNTGKFTGSKGGTLEETVTMNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLEANRDL
VLRRLIECLGRDRTRHQVAEVTSLGLVQMTRKRVGQGLVEAFSTTCEVCEGRGYITHEHP
VERGETTEQAEKADAKRAKGRAKKAKAEPEVADDPKRSEVKAALNSIAAAAVHKHEESEV
DSELKADEQGEEKSKRARGRRSRSKSSDQIAQSAPKQDNLGDSDNVHDAPHADGEDEASQ
GKERRRSRSRKGVSRNGGAEPVEATSSADASREASRDVAGHDDDAHASAPSGNRERAVTT
ERKSRIVSSSGTITPTSSASSAFLSFPKK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaagccaatgagaaagtgacctcgagcgaggccgccgagaagaatacaacc
aaacgtgccgctcgccagcgcaaggcgcctgcaaagcatgaaggcgcggcagagtcggtg
gcgcagtcgctcgccgaactcgcccaagagaaggggaagtcggtgttttctgcggccgag
gaggcggaaaccactccagatgttgtagcgccagctccgatgaccgctcttctgttccag
gagccggacgtcgagaaggctgtccgtacacgccgaacccgtaagaaggtttccgagccc
gacgtcgacgctccggaagcctcggaagagttcgctgaggaagatgctccgaagcgccgc
cgtcgcggaacgcgagggggtcgcaggagcgccgaggtcgaggcgccaaattcaagcgac
gaggaatcggctgaagattccactgatgaaacatcgaagaagaagcgtacccgacgtaag
aagtctgatgccgcggacgcggttgctgagaagtctgatgcgaagacggaatcgggggag
agctcggaacccagcgagggggaggaaatctcggtgcgtcgccgtcgtcgccgccgttct
gatgccgacgaagtaaccgctccgaaggggtcgacacgtctcgaagcgaagcgtcagcgt
cgcaaggaaggtcgcgcagctgggcgtcgtcgccagacgatatcggaagccgagtatctc
gcacgtcgtgagtcggttgagcgtgaaatgctcgtgcgtgaacgcgacggattgaaccag
attgcagtgattgaagacggcgtgcttgtcgagcacttcgtcgcgcggcatacgcaaacg
tcgatggtgggcaacgtctaccttgggcgcgtgcaaaacgtgctgccatcgatggaagct
gcgttcgtcgatattggaaagggccgtaacgcagttctttacgctggcgaagtgaactgg
gaagctgcgggcttagaaggtaagccgcgcaagattgagcaggcgctcaagagtggcgat
actgtgctcgtgcaggtcacgaaggatcctattgggcataagggtgcacgtcttacctcg
caagtgacgcttgccggccgccacctcgtactcgtcccgagtggtgccatgacgggaatc
tcccgcaagctccccgagcgtgagcgagcccgcctcaagaagatcctcaaggagatcgtt
cccggagatcatggcgtcatcgttcgcaccgcggcggaaggtgccaccgaagagcagttg
cgtgacgacgtcgagcgcctgacaaaggcctggaaagacatcgaggcgaaagcgaagtcc
acaaagaacgccccgtcattgctgaagggtgagccggagctcgccgttcgcgtggtccgc
gacatcttcaacgaggatttccgcgccctcaaagttcaagggcgcaacgcgtgggagacc
atctccgagtatgtccgcgatctgtcgcccgaattaatggatcgcgtcgagcattgggaa
tcggatgcggatatcttcgctgccaaccgggtcgatgagcagctccagaaggcgttcgat
cgcaaggtgatcctgccctccggcggctcgctcgtgatcgaccgtaccgaggcaatgacg
gtgattgacgtcaataccggcaagttcacgggttcgaagggtggcacgctcgaagagacc
gtcacaatgaataaccttgaggccgctgaagagattgtgcgacagctccggctgcgcgat
atcggtggaatcatcgtggtggacttcatcgatatggtgctcgaggctaaccgggatctc
gtgttgcgccgtctcattgagtgcttggggcgcgatcggacccgccaccaggtggctgag
gtaaccagcctcggactggtccagatgacgcgcaagcgtgtcggccagggcctcgttgag
gcgttctccaccacgtgtgaagtttgcgaggggcgtggctacattacgcacgaacatcct
gttgagcgtggagaaaccaccgagcaggctgagaaggccgacgcgaagcgtgccaagggg
cgtgcaaagaaggcgaaggctgagccggaagttgccgacgatcccaagcgttcagaagta
aaagctgctctgaactccatcgctgcagcggcggtgcataagcatgaggaaagtgaggtt
gattccgagctgaaggctgatgagcagggcgaggaaaagtcgaaacgtgcccgcgggcgt
cggagccgttcgaagagctcggaccagattgcccaaagtgcacccaagcaggataacctg
ggcgattctgataacgttcacgatgccccgcacgccgatggtgaggatgaggcctctcaa
gggaaggagcgtcgccgttcccgctcccgcaagggtgtgtcgcggaacgggggtgctgag
cctgtcgaagccacctcgagtgcagatgcgtctcgtgaagcctctcgtgacgtagcaggc
cacgatgatgatgcccatgcgtcggcgccttcagggaatcgggagcgtgccgtgacgacg
gagcgcaagtctcgaatcgtgtcgtcctccgggacgatcacgccgacgtcgtctgcgtca
tcggcgttcctgagcttccctaagaagtaa
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