Arcanobacterium wilhelmae: P8A24_05820
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Entry
P8A24_05820 CDS
T08983
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
awl
Arcanobacterium wilhelmae
Pathway
awl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8A24_05820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awl03019
]
P8A24_05820
Messenger RNA biogenesis [BR:
awl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
P8A24_05820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Cuticle_1
Motif
Other DBs
NCBI-ProteinID:
WFN89724
LinkDB
All DBs
Position
complement(1292607..1294283)
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AA seq
558 aa
AA seq
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MTKEKLPAPLAPDTVRIVPLGGIGEIGRNMTVFECNGRLLVVDCGVLFPEENQPGIDLIL
PDFTYIKDRLDDIDAIVLTHGHEDHIGGVPYLLRMRKDIPLVGSELTIALVESKLAEHRI
QPYTLVVKEGDVEQLGAFECEFIAVNHSIPDALAVLMKSKGGTILHTGDFKMDQLPLDGR
VTDLRAFARAGDDGVDLFMVDSTNAEIPGFIRSEAEIGPVIESVFAQATGKVVVASFASH
VHRVQQVLNAAHKYGRKVCFVGRSMVKNMGIAADLGYLDVPENTLIDLKKSDSVPPQEIC
YMSTGSQGEPMAVLSRIASGTHKSITVGPGDTVILASSLIPGNENSVFGLINRLTKLGTN
VVHKGNARVHVSGHCAEGELLYAYNIVEPVNVMPIHGEPRHLVANGKLAVKTGVPPENVI
LAEDGTVVDLHDGMAKIVGKVDVGLVFVDGSSVGEISEADLTDRLTLGAEGFISIFAVVD
GQERTILTGPHIQARGMAEDDSVFEDIQADVTDALQKAVLNESNTPYQMQQAMRRVIGRW
AARKLRRSPMILPTVIEV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaagaaaaactgccggcaccgcttgcgccggatactgtaagaattgttcccctc
ggcggcattggggaaattggccgcaacatgaccgttttcgaatgcaacgggcgcctgctc
gtggtcgattgtggcgtgctcttcccggaagagaaccagccaggcatcgatctgattctg
cccgatttcacctatatcaaggatcgcctggatgatattgatgcgatcgtgcttacccac
gggcatgaggatcacatcggtggtgttccctacctgttgcgtatgcgcaaggacatcccg
ctcgttggctccgagctcactatcgcattggtggagtcgaagctcgccgagcatcggatc
cagccgtacacgctggtggtgaaagaaggcgacgtcgagcagcttggcgcgttcgagtgt
gagttcatcgcggtgaaccattcgatccctgatgcgcttgccgtgctgatgaagtcgaag
ggtgggacgatcctccataccggcgatttcaagatggatcagcttccgttggacgggcgg
gtgacggatcttcgtgcgttcgcccgagccggcgacgacggtgtggacctgttcatggtg
gattccacgaacgctgagattccggggttcattcgctcggaggccgagatcggcccagtg
atcgagtcggtgtttgcgcaggccaccggcaaggttgtggtggcgtcgttcgcttcgcac
gtgcatcgcgtgcagcaggtcttaaacgcagcgcataagtatggtcgcaaggtctgcttc
gttggccggtccatggtgaagaatatggggatcgcggcggatctcggctaccttgacgtt
ccggaaaacacgctgatcgatttgaagaaatcggattcggttccgccccaggagatctgc
tacatgtccacaggttcgcaaggcgaaccgatggctgtgctttcgcgtatcgcttccggc
acccacaagtcgatcacggtgggccctggcgatacggtgattctcgcatcctcgctgatc
ccgggtaatgagaactcggtgttcggcctgattaaccgtctcacgaagctcgggacgaac
gtggtgcacaagggtaatgcgcgcgtgcacgtttccggccactgtgcggagggtgagctc
ctgtatgcctacaacattgtcgagccggtgaacgtgatgccgattcacggcgagcctcgc
catctggttgctaacggcaagctcgccgtgaagacgggcgtcccgccggagaacgtgatc
ctggctgaagatggcaccgtggtggatcttcacgacggcatggcaaagatcgtgggcaag
gtcgatgttggcctggtgttcgtggacggttcatcggttggcgagatctcggaggcggat
ctcacggatcgtctcacgcttggtgcggagggctttatctcgatcttcgcggtggtcgat
ggccaggagcgcacaatccttaccggcccgcatattcaggcgcgtggcatggcagaggac
gattcggtattcgaggatattcaagcggacgttaccgacgcactccagaaagcggtactc
aacgagtcgaatactccgtatcagatgcaacaggcgatgcgccgtgtgatcggccgttgg
gcggcgcgcaagttgcgccgctcgccgatgattcttccaacggtcatcgaggtctga
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