Aeromicrobium wangtongii: NQV15_02395
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Entry
NQV15_02395 CDS
T09548
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
awn
Aeromicrobium wangtongii
Pathway
awn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQV15_02395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awn03019
]
NQV15_02395
03009 Ribosome biogenesis [BR:
awn03009
]
NQV15_02395
Enzymes [BR:
awn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQV15_02395
Messenger RNA biogenesis [BR:
awn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQV15_02395
Ribosome biogenesis [BR:
awn03009
]
Prokaryotic type
rRNA helicases
NQV15_02395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
P-loop_SecA
AAA_19
CMS1
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UUP14183
LinkDB
All DBs
Position
463069..464904
Genome browser
AA seq
611 aa
AA seq
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MTTEIPVETPTFADLGLIDVLVERLSALGYETPTPIQAKAIPTMLEGKDVVGLAQTGTGK
TAAFALPILQKIDPKNSKTQAIVLAPTRELALQVCEAIATYAVNMPGIRVLPVYGGQGYG
FQLQGLQRGAHIVVGTPGRVIDHLERGSLDLTALEFLVLDEADEMLNMGFAEDVERILAD
TPEYKQVALFSATMPKMIRSLAKKYLHDPVDIATPKATTSTATVRQRWIQVSHHHKLDAL
TRLLEVETGDGMIVFVRTKSATEEVAEKLRTRGYTAAALNGDLVQAQRERTVSQLKGGQI
DIIVATDVAARGLDVERITHVINYDIPHDTEAYVHRIGRTGRAGRTGEAILFVTPRERRM
LSAIEKVSGRPVEEMSVPSAEEVNERRAGRFAQAITSSMGSPQFHAFRALVEEYASENDV
SMTDVAAALAVMSQADKDFFLRPDPPKAAPRARVEREEWSGEGRKKPAGFGRSDRLPAEG
AAVYRVAVGKRHKVGPSAIVGALANEGSLKRSDFGKITIGQDHTLVELPADLPDAVFEAL
ANTRISGKLIDLQPDSGPPIRRTREDRKPYKKSHENRPYPSRAADRESYTKKSPRSGDAP
TGDSTRKPRHK
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgaaattcccgttgagacaccgaccttcgccgacctcggcctgatcgacgtc
ctcgtcgagcgcctgtcggcgctgggctacgagacccccacgccgatccaggcgaaggcc
atcccgaccatgctcgagggcaaggacgtcgtcggcctcgcgcagaccggcaccggcaag
accgccgcgttcgcgctgccgatcctgcagaagatcgatccgaagaacagcaagacgcag
gccatcgtcctggccccgacccgcgagctcgcgctgcaggtctgcgaggccatcgccacg
tatgcggtcaacatgcccggcatccgcgtgctgccggtgtacggcggacagggctacggc
ttccagctgcagggtctgcagcgcggcgcgcacatcgtcgtcggtacgccgggacgcgtc
atcgaccacctggagcgcggcagcctggacctgacggcgctggagttcctggtcctggac
gaggccgacgagatgctcaacatgggcttcgcggaggacgtcgagcgcatcctggccgac
acccccgagtacaagcaggtcgccctgttctcggccacgatgcccaagatgatccgcagc
ctggccaagaagtacctgcacgacccggtcgacatcgcgacccccaaggccaccacctcg
accgcgacggtccgccagcgctggatccaggtctcgcaccaccacaagctcgacgccctc
acgcgtctgctggaggtcgagacgggcgacggcatgatcgtgttcgtccgcaccaagtcg
gccaccgaggaggtcgcggagaagctgcgcacgcgcggctacaccgccgcggccctgaac
ggtgatctcgtccaggcccagcgtgagcgcaccgtctcccagctcaagggtggccagatc
gacatcatcgtcgcgaccgatgtcgccgcccgcggcctggacgtcgagcgcatcacccac
gtcatcaactacgacatcccgcacgacaccgaggcgtacgtccaccgcatcggccgcacg
ggtcgcgccggacgtaccggcgaggcgatcttgttcgtcacgccgcgcgagcgccgcatg
ctgtcggcgatcgagaaggtctcgggtcgcccggtcgaggagatgagcgtcccgtcggcc
gaggaggtcaacgagcgtcgcgccggccggttcgcccaggccatcacctccagcatgggc
tcaccgcagttccacgccttccgggcgctggtggaggagtacgccagcgagaacgacgtc
tcgatgacggacgtcgccgcggccctggccgtcatgagccaggccgacaaggacttcttc
ctgcgtcccgacccgcccaaggcggcgccgcgtgcgcgcgtcgagcgcgaggagtggagc
ggcgagggtcgcaagaagccggccggattcggtcgcagcgaccgtctgcccgccgagggg
gctgcggtgtaccgcgtcgcggtcggcaagcgtcacaaggtcggtccgtcggcgatcgtc
ggtgcactggccaacgagggcagcctgaagcgctcggacttcggcaagatcacgatcggt
caggaccacacgctcgtcgagctgcccgccgatctgcccgacgcggtgttcgaggcgctg
gccaacacccggatctcgggcaagctgatcgacctgcagcccgactccggcccgccgatc
cgtcgcacccgcgaggaccgcaagccctacaagaagtcccacgagaaccgtccgtacccg
tcgcgggccgctgaccgggagtcgtacacgaagaagagcccgcgctccggcgacgccccg
accggcgactccacccgtaagccacgccacaagtag
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