Aeromicrobium wangtongii: NQV15_05840
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Entry
NQV15_05840 CDS
T09548
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
awn
Aeromicrobium wangtongii
Pathway
awn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQV15_05840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awn03019
]
NQV15_05840
03400 DNA repair and recombination proteins [BR:
awn03400
]
NQV15_05840
Enzymes [BR:
awn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQV15_05840
Messenger RNA biogenesis [BR:
awn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQV15_05840
DNA repair and recombination proteins [BR:
awn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NQV15_05840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
AAA_30
DUF4423
Motif
Other DBs
NCBI-ProteinID:
UUP14832
LinkDB
All DBs
Position
complement(1156413..1158032)
Genome browser
AA seq
539 aa
AA seq
DB search
MTLDDDIDRIARPLLPAAAELHPDQRRAIRSVAERDTLVVLPTGSGKTLVYQVAARLLGG
VTLVISPTLSLQADQLAGLRECGFRAAAVNGNLRLDGRRQVLDDAASGRLDVVLLTPEQA
TNDDVLDPLLRADVRLFAVDEAHCVATWGVDFRPHYLALDGVIERLGRPRVLGLTATAPP
RTRRAVAEALGTPGMAMVVGNADRPEIHLSARVTADEDATEKALLELVDAHDTDAGAMLV
YAATRRRVDELHERMTAAGYEVDRYHGGMRPAERGDVLRRFRDGGARLVLATSAFGLGID
RADVRQVVHVDPPESVDELWQEIGRAGRDGQPASAVLITRPGGYGLRRYFASVAGASDGD
VYAVVVTLRDLRGAQRPAAIAAAAGLSPRRSRAALNLLERAGAVLEDRAGVRLSTRAHTE
TILDRVDAMRESLRAMQESEVDLVQRYAETDDCRRRLVLELLGEAHPDPCGRCDSCDAGT
STSASRRPFPLGAEVRHASFGNGRIAQYDGDRVVVLFEQEGYRTLDLDLVESDGLLVAR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
gtgacactcgacgacgacatcgaccggatcgcacggccgctgctccccgcggcggccgag
ctgcatcccgaccagcggcgcgcgatccgcagcgtcgccgagcgcgacacgctcgtcgtg
ctgccgaccggaagcggcaagaccctcgtgtaccaagtggcggcccggctgctcggcggc
gtgacactggtgatctccccgacgttgtcgctgcaggccgatcagctcgccgggctgcgt
gagtgcggcttccgggccgcggccgtcaacggcaacctgcgcctggacgggcgccgccag
gtgctggacgacgcagcctccggccggctcgacgtcgtcctgctgacgcccgagcaggcg
accaatgacgacgtcctcgacccactcctgcgcgccgacgtgcggctgttcgccgtcgac
gaggcgcactgcgtggcgacgtggggcgtcgacttccggccccactaccttgcgttggac
ggcgtcatcgagcgactgggacggccgcgcgtgctgggcctgaccgcgaccgcgccgccg
cgcacccgtcgcgccgtcgcggaggccttgggaacccccggcatggccatggtcgtcggc
aatgccgaccggcccgagatccacctgtcggcccgagtcaccgccgacgaggacgccacc
gagaaggcgctgctggagctggtcgacgcgcacgacaccgatgcaggggcgatgctggtc
tacgccgcgacgcgccgccgggtcgacgagctgcacgagcgcatgaccgcggccgggtac
gaggtcgaccggtaccacggcggcatgcggcccgccgagcgcggtgacgtcctgcgccgc
ttccgggacggcggggcgcgactcgtgctggccacctccgcattcgggctgggcatcgac
cgcgcggacgtccgtcaggtcgtccacgtcgacccgcccgagagcgtcgacgagctgtgg
caggagatcggccgggccgggcgggacggtcagcccgcgtcggccgtcctcatcacccgc
cccggcggttacggcctgcgccgatacttcgcatcggtcgccggggcgtccgatggtgat
gtgtacgcggtggtcgtgacgctgcgagacctgcgcggggcgcaacgtccggcggcgatc
gccgctgccgctggcttgtcgccccggcgctcccgcgccgccctcaacctgctggagcgg
gctggcgccgtgctcgaggaccgcgccggcgtccggctgtcgacccgcgcccacaccgag
acgatcctggaccgggtcgacgcaatgcgcgagagcctccgcgcgatgcaggagtcggag
gtggatctcgtccagcgatacgccgagaccgacgactgccggcggcggctggtgctggag
ctgctgggtgaggcgcatcccgatccctgcggtcggtgcgactcgtgcgacgcgggcacg
tcgacgtccgccagccggcggccgttcccgctgggcgccgaggtgcggcacgccagcttc
ggcaacgggcgcatcgcgcagtacgacggggaccgggtcgtcgtgctgttcgagcaggag
gggtatcggacgctggacctggatctcgtggagtccgacggactgctcgtcgcccgctga
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