Aeromicrobium wangtongii: NQV15_08710
Help
Entry
NQV15_08710 CDS
T09548
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
awn
Aeromicrobium wangtongii
Brite
KEGG Orthology (KO) [BR:
awn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awn03019
]
NQV15_08710 (hrpA)
Enzymes [BR:
awn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NQV15_08710 (hrpA)
Messenger RNA biogenesis [BR:
awn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NQV15_08710 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND_NTPase5
WHD_HA2
nSTAND3
NACHT
AAA_30
T2SSE
SLFN-g3_helicase
Cas3-like_C_2
AAA_16
ResIII
SRP54
PhoH
TsaE
Zeta_toxin
AAA_23
ABC_tran
SMC_N
Motif
Other DBs
NCBI-ProteinID:
UUP15377
UniProt:
A0ABY5MD27
LinkDB
All DBs
Position
complement(1749566..1753165)
Genome browser
AA seq
1199 aa
AA seq
DB search
MKIAFDSALPITDRHDDIAAAMRDHQVVVVAGETGSGKTTQLPKIAYELGRRAIAHTQPR
RIAARSVAKRIADECEVDLGAEVGYAVRFDDQTSEATAIRLVTDGLLLAELQRDRRLSRY
DTIIIDEAHERSLSIDFLLGYLKQLLPRRPDLKVVITSATIDVERFAEMFDAPVIEVSGR
TFPVEIRYRPLLESDADNELEAIAEAVAELPSEGDILVFLSGEREIRDAAEFLAGQKYPR
TEILPLYGRLAAADQQKIFSSHPGRRIVLATNVAETSLTVPGIRYVIDPGFARISRFSQR
LKVQRLPIEPISQASAAQRAGRCGRVADGICIRLYSEEDHDSRPEFTDPEIQRTNLASVL
LQMASLDLGSIKDFPFLDPPDSRAVSDGMNLLYELNALDTSTAGGNRLTKIGRRMSTLPT
DPRLARMLLAADKLGCLADVLVIVSAMSIQDPRERPLEHQQAADEKHRRFRDPTSDFLSY
LTLWKYIREMRDELSSSAFRRLCRDEFLHWLRIREWQDVHSQLRRTAKDMGLKPGAIGAD
PDRIHQALLSGLLSHIGLKDADGREYLGARQAKFMIFPGSALAKKPPRMVMVGELVETSR
LWGRTAAKIQPEWVEAAGEHLVNHVYSEPHWSTRRGAVMAREKVLLFGIPLIADRLVQFG
RIDPITSRDLFIRHALVQGEWRTHHKFFAANQKMIAGVEELEERLRRRDLRVDDETLYAF
YDQRIPADVVSTRHFDSWWKKAQRDQPDLLTFDPAMLSNDTDGAEEEFPREWHSDGESYP
LTYAFEPGMQDDGVTVDLPVDRLMTVDDRAFDWHVPGHRVELVTELIRSLPKRLRREFVP
ASQFAPRLVEAMDPDASDLSEELARQMRLLNGTVVSPSDFDFDSLPPHLRVTFRVMDGTT
ELARGKDLAALRAELSSHIRADLTKVARQEERAGLRSWDVGTIEPAITAGQVTGYPALVD
EGTSVALRILDSAVEQKVAMIKGQARLLSFSLATPVTQLGRSLDLHAKLLLSTGPHKDAA
AVIEECWLAALEALVVRHGGPVWDEVTFSLLHDTVRAEAYDETERAVQSVLATLRALGEL
TPLPSTEAGEDVRVQLSWLIYPGFIRDAGVDQLRRLPLYLQAARRRLDAPLTDDLLAAQD
LEARFHARTADLSVWARLSPDVQHVRWALEELRLSLLAQNLRTAFPVSVKRVTALVDAL
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcgcctttgacagtgccctcccgatcacggaccggcacgacgacatcgccgcc
gccatgcgcgaccaccaggtcgtcgtcgtggccggcgagaccggatccggcaagaccacc
cagctgccgaagatcgcctacgagctgggacgtcgcgcgatcgcccacacccaaccccgt
cgcatcgccgcacgctcggtcgccaaacgcatcgccgacgagtgcgaggtcgacctcggc
gcggaagtcggctacgccgtgcgcttcgacgaccagaccagcgaggccaccgcgatccgc
ctggtcaccgacggtctgctgctggccgagctgcagcgcgaccggcgcctgtcgcgctac
gacacgatcatcatcgacgaggcccacgagcggtcactgtcgatcgacttcctgctgggc
tacctcaagcagctgctcccccggcgtcccgacctcaaggtcgtcatcacctccgcgacg
atcgacgtcgagcgtttcgcggagatgttcgacgcccccgtcatcgaggtcagcggccgc
acgttccccgtcgagatccggtaccgaccgctcctggagtccgatgccgacaacgagctc
gaggccatcgccgaggccgtggccgagctgcccagcgagggcgacatcctggtcttcctg
tccggcgagcgtgagatccgcgacgcggcggagttcctcgccggccagaagtacccgcgc
accgagatcctgccgctgtacggacgcctcgcggccgccgaccagcagaagatcttcagc
agccacccgggacgccgcatcgtcctggccaccaacgtcgccgagacgtccttgacggtg
ccgggcatccggtacgtcatcgacccgggcttcgcccgcatctcccggttcagccagcgc
ctgaaggtccagcgtctgcccatcgagccgatctcccaggccagcgccgcccagcgcgcc
ggccggtgtggtcgcgtcgcggacggcatctgcatccggctgtactccgaggaggaccac
gacagccgcccggagttcaccgacccggagatccagcgcaccaacctggcctcggtcctg
ctgcagatggcctcgctcgacctgggcagcatcaaggacttcccattcctcgacccgccg
gactcccgcgcggtcagcgacggcatgaacctgctgtacgagctcaacgcgctcgacacg
tcgacggcgggcggcaacaggctgaccaagatcggccggcgcatgtcgacgctgccgacc
gatccacggctcgcccggatgctgctggccgccgacaagctcggctgcctggccgacgtc
ctggtcatcgtgtccgcgatgtcgatccaggacccccgtgagcgaccgctggagcaccag
caggccgccgacgagaagcatcgccggttccgcgacccgacgtcggacttcctgtcgtac
ctgacgttgtggaagtacatccgcgagatgcgcgacgagctgtccagctcggcgttccgg
cgactgtgccgtgacgagttcctgcactggctgcgcatccgcgagtggcaggacgtccac
tcccagctgcgccgcaccgccaaggacatgggtctcaagcccggcgcgatcggcgcggac
cccgaccgcatccaccaggcgctgctgtcgggcctgctgtcgcacatcgggctcaaggac
gccgacgggcgggagtacctcggcgcgcggcaggccaagttcatgatcttccccggctcc
gcgctggccaagaagccgcctcgcatggtcatggtcggtgagctggtcgagaccagccgg
ctgtggggacggaccgccgccaagatccagcccgagtgggtcgaggccgccggcgagcac
ctcgtcaaccacgtctacagcgagccgcactggtcgacccgccgcggtgccgtcatggcg
cgcgagaaggtgctgctgttcggcatcccgctgatcgccgaccgcctggtgcagttcggc
cgcatcgacccgatcacgtcgcgcgatctgttcatccggcacgcgctcgtccagggcgag
tggcgcacgcaccacaagttcttcgccgcgaaccagaagatgatcgccggcgtcgaggag
ctcgaggagcggctgcgccggcgcgacctgcgggtcgacgacgagacgctgtacgcgttc
tacgaccagcgcatccccgctgacgtcgtctcgacccgccacttcgactcgtggtggaag
aaggcccagcgcgaccagcccgacctgctgaccttcgaccccgcgatgctcagcaacgac
accgacggcgccgaggaggagttcccccgtgagtggcactccgacggcgagtcgtatccg
ctgacgtacgccttcgagccgggcatgcaggacgacggcgtgaccgtcgacctcccggtc
gaccggctcatgacggtcgacgaccgcgccttcgactggcacgtcccgggccaccgcgtc
gagctggtcaccgagctcatccggtcgctgcccaagcgcctgcggcgcgagttcgtcccc
gccagccagttcgccccgcgcctggtcgaggcgatggaccctgatgcgtccgacctcagc
gaggagctcgcgcgccagatgcgtctgctcaacggaaccgtcgtgtcgccgtcggacttc
gacttcgactcgctgccgccgcaccttcgggtgacgttccgtgtcatggacggcaccacg
gagctcgcgcgcggcaaggacctcgccgcgctgcgcgccgagctgtccagccacatccgc
gccgacctgacgaaggtcgcgcgccaggaggagcgcgccgggctgcgcagctgggacgtc
gggacgatcgagccggcgatcaccgccggacaggtcaccggctacccggcgctggtggac
gagggcacctcggtggcgctgcggatcctggacagcgcggtcgagcagaaggtcgcgatg
atcaaggggcaggcacgcctgctctcgttctcactggccacgcccgtgacgcagctcggc
cggtccctggacctgcacgccaagctgctgctgtccacgggcccgcacaaggacgccgcg
gcggtcatcgaggagtgctggctggccgcgctggaggccctggtcgttcgtcacggcgga
ccggtgtgggacgaggtcaccttctcgctcctgcacgacaccgtgcgcgccgaggcctac
gacgagaccgagcgagccgtccagagcgtcctggcgaccctgcgggcgctcggtgagctg
actcccctgcccagcacggaggccggcgaggacgtccgggtgcagctgtcgtggctgatc
taccccgggttcatccgcgatgcgggcgtcgaccagctgcgccgcctgccgctgtacctg
caggctgcccgccgccgcctggacgcgccgctgaccgacgatctgctcgcggcacaggac
ctggaggcccggttccatgcgcggaccgccgacctgagcgtgtgggcgaggctctcgccg
gacgtccagcacgtccggtgggcgctggaggagctgcgcctgagcctgctggcccagaac
ctgcgcacggccttcccggtctcggtcaagcgcgtcacggccctggtcgacgcgctctag
DBGET
integrated database retrieval system
