KEGG   Aeromicrobium wangtongii: NQV15_09715
Entry
NQV15_09715       CDS       T09548                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
awn  Aeromicrobium wangtongii
Brite
KEGG Orthology (KO) [BR:awn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:awn03016]
    NQV15_09715
Enzymes [BR:awn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     NQV15_09715
Transfer RNA biogenesis [BR:awn03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    NQV15_09715
 Prokaryotic type
   tRNA splicing ligases
    NQV15_09715
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: UUP12136
UniProt: A0ABY5M4R3
LinkDB
Position
complement(1960684..1961856)
AA seq 390 aa
MEKLSQRLFSWASILDSNARDQAHTASSMPFIYPHLALMPDAHLGKGATVGSVIPTLGAI
IPAAVGVDIGCGMIAVKTPYVASELPTDRRTLRLAIERAIPLSAGVANRAITRAHTQARV
NELRADAEAAGFDPADRAKSWELQLGTLGSGNHFIEVSLDEDDRVWLFLHSGSRGVGNKI
AQRHIAIAQELCRKWWIDLPDRDLAYLVEGTDEFDAYITELQWAQKYALLNRAEMMDRVV
ACFADWVGTDEVERLEEINCHHNYTAREKHFGKDVWLSRKGAIDASSGTMGLIPGSMGTR
SYVVVGKGNPVALNSSPHGAGREYSRSKARKQFTQDDLRVAMGDIEYRDTAAFVDEIPAA
YKDIDVIMQDAADLVEVRHTLRQIVNVKGD
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggagaagctctcccagcggttgttcagctgggcttccatcctggactccaacgcccgc
gatcaggcccacacggccagcagcatgccgttcatctacccgcacctcgcactgatgccc
gacgcccacctgggcaagggggcgacggtcggctcggtgatcccgacgctcggcgcgatc
atccccgctgctgtcggggtcgacatcggttgcgggatgatcgcggtcaagacgccgtac
gtggcctccgagctgccgacggatcgccggacgctgcgcctggcgatcgaaagggcgatc
ccgttgtccgccggggtcgccaaccgcgcgatcacccgagcgcacacccaggcgcgcgtg
aacgagctgcgcgccgatgccgaggccgctgggttcgacccggccgaccgggcgaagagc
tgggagctgcagctcggcacgctcggatcgggcaatcacttcatcgaggtcagcctcgac
gaggacgaccgggtgtggttgttcctgcactccggatcgcgcggtgtcggcaacaagatc
gcgcagcggcacatcgcgatcgcgcaggagctgtgccgcaaatggtggatcgatctgccg
gatcgcgatctggcgtacctcgtggagggcacggacgagttcgatgcgtacatcaccgag
ctgcagtgggcgcagaagtacgcgctgctcaaccgcgcggagatgatggaccgggtcgtg
gcgtgcttcgcggactgggtcggcacggacgaggtggagcggctcgaggagatcaactgc
caccacaactacacggcccgggagaagcacttcggcaaggacgtctggctgtcccgcaag
ggggcgatcgacgcttcctccggcacgatgggcctgatcccggggtccatgggaacgcgg
tcgtacgtcgtggtgggcaagggcaacccggttgccctgaactcgtccccccacggggcc
gggcgcgagtacagcaggtccaaggcccgcaagcagttcacccaggacgatctgcgggtc
gcgatgggagacatcgagtaccgcgacacggcggccttcgtcgacgagatccccgcggcg
tacaaggacatcgacgtgatcatgcaggacgctgctgacctggtcgaggttcgtcacacg
ctgcggcagatcgtcaacgtgaagggcgactga

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