Aeromicrobium wangtongii: NQV15_11405
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Entry
NQV15_11405 CDS
T09548
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
awn
Aeromicrobium wangtongii
Pathway
awn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQV15_11405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awn03019
]
NQV15_11405
03016 Transfer RNA biogenesis [BR:
awn03016
]
NQV15_11405
Enzymes [BR:
awn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NQV15_11405
Messenger RNA biogenesis [BR:
awn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NQV15_11405
Transfer RNA biogenesis [BR:
awn03016
]
Prokaryotic type
tRNA degradation factors
NQV15_11405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
PCB_OB
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UUP12460
LinkDB
All DBs
Position
complement(2322381..2324606)
Genome browser
AA seq
741 aa
AA seq
DB search
MSELHSVETVIDNGAFGTRTIRFETGVLAQQAAGAVSAFLDDDTMLLSATTAGKHPKDHF
DFFPLTIDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPTFKKGLRNEVQVV
ITVLALNPDTPYDVLAINAASASTQISGLPFTGPVGATRVALIDGQWVGFPTHSQLENAV
FDMVVAGRVAGDDVAIMMVEAESTESTWDLVQSGVQAPTEEIVAGGLEAAKVFIKQLCEA
QAELAAVAAKPVRDFPIFLDYEDDVLEAVEAVAKADLAQALTIAGKAEREERESEIKADV
IDKIGADFEGREKEIGAAIRAVTKTVVRERVLRDKVRIDGRGLEDIRALSAEVGIVPRVH
GSALFQRGETQILGITTLNMLGLEQKLDTLSPETARRYMHNYNFPPYSTGETGRVGSPKR
REIGHGALAGRALLPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTLGLLNAGVPLR
APVAGIAMGLISGEVDGEQKFVTLTDILGAEDAFGDMDFKVAGTREFVTALQLDTKLDGI
PADVLAGALQQAYGARVAILDVMAEAIDEPDEMSPYAPRIITIKIPVDKIGEVIGPKGKI
INQIQDDTGANISLEDDGTVYVGAENGEAAEAARDAINAIANPTMPEVGERYLGTVVKTV
DFGAFVSLSPGRDGLLHISKLRELNGGQRVNNVEDVVSVGQKIQVEIAELGDRGKLSLIP
VIDKSDEAPASSDEESATADA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaactccactccgtcgagacagtcatcgacaacggtgccttcggcacccgcacc
atccgtttcgagacgggcgtcctcgcccagcaggccgccggcgcggtctccgcattcctc
gacgacgacaccatgctgctgtcggccaccacggccggcaagcaccccaaggaccacttc
gacttcttccccctgacgatcgacgtcgaggagcggatgtacgccgcgggacgcatcccg
ggctcgttcttccgtcgtgagggtcgtccctccgaggacgcgatcctcacctgccgcctg
atcgaccgcccgctgcgcccgaccttcaagaagggtctgcgcaacgaggtccaggtcgtc
atcacggtcctggcgctcaaccccgacaccccgtacgacgtgctcgcgatcaacgcggcc
tccgcgtcgacgcagatctccggcctgccgttcaccggccccgtcggcgccacccgcgtc
gcgctgatcgacggccagtgggtcggcttcccgacgcacagccagctcgagaacgcggtc
ttcgacatggtcgtcgccggccgtgtcgccggtgacgacgtcgccatcatgatggtcgag
gccgagtcgaccgagtcgacctgggacctcgtccagagcggcgtccaggcgcccaccgag
gagatcgtcgccggtggcctcgaggccgccaaggtcttcatcaagcagctgtgcgaggcg
caggccgagctcgctgcggtcgccgccaagccggtccgcgacttcccgatcttcctggac
tacgaggacgacgtcctcgaggccgtcgaggccgtcgccaaggccgatctggcccaggcc
ctgacgatcgccggcaaggccgagcgcgaggagcgcgagtccgagatcaaggccgacgtc
atcgacaagatcggcgccgacttcgagggtcgcgagaaggagatcggtgcggccatccgc
gcggtcaccaagaccgtcgtccgcgagcgcgtcctgcgcgacaaggtccgcatcgacggc
cgtggcctggaggacatccgtgccctcagcgccgaggtcggcatcgttccccgcgtccac
ggctccgcgctgttccagcgcggtgagacccagatcctgggcatcacgacgctgaacatg
ctgggcctggagcagaagctcgacacgctctctcccgagacggcgcgccgctacatgcac
aactacaacttcccgccctactcgaccggtgagaccggccgggtcggttcgccgaagcgt
cgcgagatcggtcacggcgccctcgcgggccgtgcgctgctgcccgtgctgccgacgcgc
gaggagttcccctacgcgatccgccaggtctccgaggcgctgagctccaacggctcgacg
tcgatgggctcggtctgcgcctcgacgctgggtctgctcaacgcgggtgtcccgctgcgc
gcgccggtcgccggcatcgcgatgggcctgatctccggtgaggtcgacggcgagcagaag
ttcgtcaccctgaccgacatcctgggagccgaggacgccttcggcgacatggacttcaag
gtcgccggaacgcgtgagttcgtcaccgccctgcagttggacaccaagctcgacggcatc
cccgccgacgtgctggccggtgccctgcagcaggcgtacggcgctcgcgtcgcgatcctg
gacgtcatggccgaggccatcgacgagccggacgagatgagcccctacgcgccgcggatc
atcacgatcaagatccccgtcgacaagatcggcgaggtcatcggccccaagggcaagatc
atcaaccagatccaggacgacacgggcgcgaacatctccctcgaggacgatggcacggtc
tacgtcggtgcggagaacggcgaggccgccgaggctgcccgcgacgcgatcaacgcgatc
gccaacccgacgatgcccgaggtcggcgagcgctacctcggcaccgtcgtcaagacggtc
gacttcggtgcgttcgtgtcgctgtccccgggtcgcgacggcctgctgcacatcagcaag
ctgcgtgagctcaacggtggccagcgcgtcaacaacgtcgaggacgtcgtctcggtcggt
cagaagatccaggtcgagatcgccgagctcggcgaccgcggcaagctctcgctgatcccg
gtcatcgacaagtcggacgaggctcctgcctcctccgacgaggagtcggccacggctgac
gcctga
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integrated database retrieval system
